Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2626 ATGATGAATACACCTCATGAAGACACCTCTCTGCTTGGTGCTGATGATGAAGAACTTCATTTCCACAGTTTATTATTCACACCACCACCTCAACCACTGCCTTATTATCACAGATCAGGAATGGCTGAAGATAATAAGGTTCCAATTCAAGATTATTCTTTCAGTGCCAATAATATATTCGCTTATCATGAATTAGACAAAATGCATCATCAGTTGCCTTCACATGGATGGATTCAGCGTTTTGGTGATTATTATGGAATATCATCAGCACATAATCATAATATTAGCGCTATAATCGAAGAAGGGTTTGGTGAAAATGACGTTTCGGAACCTCTCAGCCCTTCATCATCACATCTTCAAAGTTCTGCATTTGCCGCAGAAGATACTAATAATCAGAGTTCTGAGGAGACACTCAACCAACCAGATGGATCTCAGAACACAAATGCACCAAGTAACATTGTCATTGGTGACTTCGAAGGTTGTACGTGTAAGAAGAGTGAATGCTTGCAACTATATTGTGGATGTTTCGCTTCTGGACGCTATTGTGGAGAGTTTTGCATTTGCCTAGACTGCTCAAATAAAGAAGAATATCGTGTCAGAGTTAATTTGTGTAAGGAAAATATTAAGTCCCGTAATGCAGTGGGATTTAATCCGTGGATTATACAAAATAGCACTGATATTTCATCCAATAATGGGGATGATGACAATATGAAGAAGGAAGAGTCATTAGCAAAGCACAAATCTATTGCAGGATCCGAGCAGAAAAATGCACCAAGTAACAGTGCTCTCATGTTACCTATCAAAAAAAAAGGTTGTACGTGTAAGAAGAGTGCATGCTTCAATCGACATTGTGGATGTTTGGCTTCTGGACGCATTTGTGGAAAGTTTTGCTTTTGCCTAGACTGCTCAAATAAAGAACATCGTGACAGAGACAATAACAATATGAAGAAGGAAGAATCATTAGCAAAACACAGATCTGCAGACATACCATCTTCCCCGGTTTCAGAAGATATAAGTGCTCCCAAGAAACCTGCAGCACCCGAGAACAAAATAAGACCAAGGGACAATGACACTGATGACCGCTTGTTTTGTAACTGCCGTGGCACTACTGAATGCTTGAAACGTTACTGTAAATGTTTCGCTGCTGAAAAATACTGTGGAGAGTTTTGTTCTTGCAAAGGCTGCCGAAATGAAGAACAACATGTTGACCATGTTGTAAGTAGTAAGAAAAGAATTATGCCTATTGACCTTAATGTTCCCCCAAATAATGCGGGTAAGGTTGGGTGCTACGGGAAATGTGGATGTATTGGATGCAAAAATCCTTTTGGTGGGAAAGAAGCAGGGGAACTCCTAAATACGAAATTCCGGAATCCGGCTGCGCTTAAGGCCCCTGCTGATTTCCCTCCTAAATATGTGAAACCTAGAATTACATACATAGATATTCCAAAACTTGAAAGATCAAGAATAATGAATACACCTCATGACTCTCAACCACTGCCTTATTATCACAGAGTAATGACGGAAGATAATAAGGTTCCAATTCAAGATTATTCTTTCAATGCCAATAATATATTTTCTTATCATCATCAATTGCCTTCACATGGATGGATTCAGAATAATAATCAAGAGCATCATTGCCTCCAATATGATTATGGAGCTGCATCAAATGCTAACAGAATCAACAACTACTCAACCAATATTTCTGCTCCCTCCCCTGTTTCTCTTTTTCCTAATTCCAACCTTCATTCTTTTGGGAACTTTTTAAGTAGCGTTATGAATGATGCACAGCGTTTTGGTAATTATTATGGAAAATCATCAGCATATATTAATAATATTAGCACTATAATCGAAGAAGGGTTTGGTGAAAATGATGTTTCAGAACTTCTCAGCCCTTCATCACATCTTCAAAGTGTCCATTACAAAAAGAAAACAATTGCTGCAGAAGATGCTAATAATAATCAGAGGTCTGAGAAACTCAACCAACCTGATCGATCTGAGAACAAAATAAGACCAAGGGACACTGACACTGATGACAGCTTGTGCTGTACCTGCCGTGGCACTACTGCATGCTTGAAACGATACTGTAATTGTTTCGCTGCTGAACTCTACTGTGGAGAGTCTTGTTCTTGCAAAGGCTGCCGAAATAAAGAACAATATGTTGACCATGTTGTAAGTAGTAAGAAAAGAATTATGTTTCATGATCCAATGGCATTTGTTCCGAAGATTATGCCTATTTATGTTCCACCAAATAATGCGGTATGA 2262 0.3859 MMNTPHEDTSLLGADDEELHFHSLLFTPPPQPLPYYHRSGMAEDNKVPIQDYSFSANNIFAYHELDKMHHQLPSHGWIQRFGDYYGISSAHNHNISAIIEEGFGENDVSEPLSPSSSHLQSSAFAAEDTNNQSSEETLNQPDGSQNTNAPSNIVIGDFEGCTCKKSECLQLYCGCFASGRYCGEFCICLDCSNKEEYRVRVNLCKENIKSRNAVGFNPWIIQNSTDISSNNGDDDNMKKEESLAKHKSIAGSEQKNAPSNSALMLPIKKKGCTCKKSACFNRHCGCLASGRICGKFCFCLDCSNKEHRDRDNNNMKKEESLAKHRSADIPSSPVSEDISAPKKPAAPENKIRPRDNDTDDRLFCNCRGTTECLKRYCKCFAAEKYCGEFCSCKGCRNEEQHVDHVVSSKKRIMPIDLNVPPNNAGKVGCYGKCGCIGCKNPFGGKEAGELLNTKFRNPAALKAPADFPPKYVKPRITYIDIPKLERSRIMNTPHDSQPLPYYHRVMTEDNKVPIQDYSFNANNIFSYHHQLPSHGWIQNNNQEHHCLQYDYGAASNANRINNYSTNISAPSPVSLFPNSNLHSFGNFLSSVMNDAQRFGNYYGKSSAYINNISTIIEEGFGENDVSELLSPSSHLQSVHYKKKTIAAEDANNNQRSEKLNQPDRSENKIRPRDTDTDDSLCCTCRGTTACLKRYCNCFAAELYCGESCSCKGCRNKEQYVDHVVSSKKRIMFHDPMAFVPKIMPIYVPPNNAV* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2626 753 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 543 744 - -
Aev08g2626 753 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 99 324 - -
Aev08g2626 753 SMART CXC_2 359 401 IPR033467 -
Aev08g2626 753 SMART CXC_2 267 308 IPR033467 -
Aev08g2626 753 SMART CXC_2 156 197 IPR033467 -
Aev08g2626 753 SMART CXC_2 677 719 IPR033467 -
Aev08g2626 753 MobiDBLite consensus disorder prediction 646 676 - -
Aev08g2626 753 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 543 744 IPR044522 GO:0003700
Aev08g2626 753 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 324 412 IPR044522 GO:0003700
Aev08g2626 753 MobiDBLite consensus disorder prediction 307 354 - -
Aev08g2626 753 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 159 195 IPR005172 -
Aev08g2626 753 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 364 398 IPR005172 -
Aev08g2626 753 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 681 717 IPR005172 -
Aev08g2626 753 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 269 306 IPR005172 -
Aev08g2626 753 ProSiteProfiles CRC domain profile. 678 753 IPR005172 -
Aev08g2626 753 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 324 412 - -
Aev08g2626 753 MobiDBLite consensus disorder prediction 106 149 - -
Aev08g2626 753 MobiDBLite consensus disorder prediction 659 676 - -
Aev08g2626 753 MobiDBLite consensus disorder prediction 109 149 - -
Aev08g2626 753 ProSiteProfiles CRC domain profile. 157 307 IPR005172 -
Aev08g2626 753 MobiDBLite consensus disorder prediction 232 248 - -
Aev08g2626 753 MobiDBLite consensus disorder prediction 307 325 - -
Aev08g2626 753 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 99 324 IPR044522 GO:0003700
Aev08g2626 753 MobiDBLite consensus disorder prediction 227 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2626 Aev-Chr8 24704712 24712632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2626 682 743 CPP Transcription Factor Family AT3G22780 45.161 7.51e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aev08g2626 TCR 2.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2626 - K21776 aof:109844343 114.39