Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2570 ATGGGGAAGCCCACAGGCAGGAAGAAGCAGCAGAATCCGGCGGATTCGCGGGCCGGGCCCAACCCCAACGGCAGGCCGACCAAGCCCAAAGCCTTCGATGAGGACACGGCCATGTTCATCACCATGTCTCAGGAGCTCAGGGAGGAAGGGAACCGTCTCTTCCAAAAGAAGGACCATGAAGGTGCCATGTTAAAGTACGAAAAAGCCCTCAACCTTCTCCCTCGCAACCACATCGACGTGGCCAACCTCCGCACAAGCATGGCTCACTGTTACATGCACTTGGGCCTCGGCGAGTACCCACGCGCCATTAACCAGTGCAATTTGGCGCTCGAGGTCTCGCCCAAATACACCAGGGCTCTCTTGAGGAGGGCTAAGTGCTATGAGGCGCTGAACCGGTTGGATTTGGCCTTCAGGGATGTTCGGGCCGTCTTGGGCCTCGAGCCCAATAACCTCGCCGCGCTGGATTCGTTGGAGGGGCTGAGGAAGGTGATGGAGGAAAAAGGGATCGCTTTTGATGATTATGATTATGATGATGAGAGTGGTTTTAGTGGTGGAAAGGAGGCACCTGCCACGTGTTCGACGAAAGTTTTCAGAGAGAAAGCGAAGAAAAAGAAGGGGAAACGGGTTGAGGTTGAGGAGGAGAAGGAGGTGGATAAGGCTGTTGTTGTTGAGGCTAGTGTGGGTGACGTGAAGGACAAGAAAGTGGTTGCGAAGAAGGTGGATGAGAAGGAGGAGAAGAAGCCTGTGGAGAGGGGAAAGGAAAAGGCTGCTGTGGATGATGCCTTGGAGGACAAGGAAGTGGTTGGGAAGAAGGTTGAGGAGGACAAGTTTGTGGATGAAGGGAAGGGTATCACGAGGACGGTGAAGTTGGTGTTTGGAGAGGATATAAGATGGGCGCAGTTGCCGGAGAATTGTAGTGTGAGGTTGGTGAGAGATGTTATTAGGGATAGGTTTCCAGGATTGAAGGGTGTGCTTGTGAAGTATAAGGATGAAGAGGGTGATTTGGTTACGATCACTACTACTGAAGAGCTGAGGTGGGCTGAGTCTTGTAGTCAGGAGAATGGTTCATTTAAGCTTTATGTTTCAGAGGTCAATTCAGATCAAGAGCCTCGTTATGATGGGGTGATTGATGAGGATGAAGTGCAAGGAGATGGTAGGAAAAGAAAATTGGGTGATGGTATTGAGAATGGGGGTACGGGAGAAGATAAAGATGGAGACAATAAGATGACTGCTGTGGAGGATTGGATTGTTCGGTTTGCGAGACTGTTCAAGAACCATGTTGGGTTTGATTCTGATTCTTATCTAGATATTCATGAGCTTGCAATGAAGCTGTATACTGAGGCAATGGAGGATACTGTAACAAGTGGTGATGCTCAAGAGCTTTTTGAAATAGCTGCAGACAAATTTCAAGAGATGTCAGCTTTGGCATTACTTAATTGGGGGAGTGTTCACATGTCCAGGGCAAGGAACAGGGGTTTCTTTGCAGAAGATGGATCGAGAGAACCTTCATTTGAGCACATCAAAGCAGCGTACGAGTGGGCGCTAAAGGAATACAGGAAAGCAGAAATGAAGTATGAAGAAGCCTTGAAAATTAAGCCAGATTTTTTTGAAGGATATCTTGCTCTTGGGCACCAGCAGTTTGAGCAAGCAAGGCTCTGCTGGTCTTATGCATTGGCAAGCAAGATGGATTTACGATCTGGTCCTTCTGATGAGGTTCTACAGCTCTATAACAAAGCAGAGGACAGCATGGAGAAGGGTATCATGATGTGGGAGGAGATTGAGGAGCAGCGATTAAATGGACTATCGAAATCCGATAAATATAGACCACAGTTGGAGAAAATGGGCTTGGATAGACTTTTCAAGGATATCTCATCTGATGAAGCTTCAGAGAAGGCAGAGAAGATGAAGTTGCAGATACATCTTTTATGGGGTACATTATTGTATGAACGTTCTGTCGTGGAATATAAGCTTGGCCTACCAACATGGGAGGAATGTTTGGAGGTTGCTGTCGAAAAGTTTGAGCTAGCTGGAGCTTCTGCAACTGATATTGCCGTCATTGTAAAGAATCATTGCTCTAATGAAACTGCACTTGAAGGGTTCAAAATTGATGAGATAGTGCAGGCATGGAATGAGATGTATGATGCTCAAGGGTGGCTGTTTCGTGATCCATCATTTCGACTTGAACCACTGTTTCGTCGGCGGGTTCCTAAACTCCATTACATCTTGGAGCAATTTTAA 2238 0.475 MGKPTGRKKQQNPADSRAGPNPNGRPTKPKAFDEDTAMFITMSQELREEGNRLFQKKDHEGAMLKYEKALNLLPRNHIDVANLRTSMAHCYMHLGLGEYPRAINQCNLALEVSPKYTRALLRRAKCYEALNRLDLAFRDVRAVLGLEPNNLAALDSLEGLRKVMEEKGIAFDDYDYDDESGFSGGKEAPATCSTKVFREKAKKKKGKRVEVEEEKEVDKAVVVEASVGDVKDKKVVAKKVDEKEEKKPVERGKEKAAVDDALEDKEVVGKKVEEDKFVDEGKGITRTVKLVFGEDIRWAQLPENCSVRLVRDVIRDRFPGLKGVLVKYKDEEGDLVTITTTEELRWAESCSQENGSFKLYVSEVNSDQEPRYDGVIDEDEVQGDGRKRKLGDGIENGGTGEDKDGDNKMTAVEDWIVRFARLFKNHVGFDSDSYLDIHELAMKLYTEAMEDTVTSGDAQELFEIAADKFQEMSALALLNWGSVHMSRARNRGFFAEDGSREPSFEHIKAAYEWALKEYRKAEMKYEEALKIKPDFFEGYLALGHQQFEQARLCWSYALASKMDLRSGPSDEVLQLYNKAEDSMEKGIMMWEEIEEQRLNGLSKSDKYRPQLEKMGLDRLFKDISSDEASEKAEKMKLQIHLLWGTLLYERSVVEYKLGLPTWEECLEVAVEKFELAGASATDIAVIVKNHCSNETALEGFKIDEIVQAWNEMYDAQGWLFRDPSFRLEPLFRRRVPKLHYILEQF* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2570 745 Gene3D - 283 364 - -
Aev08g2570 745 ProSiteProfiles PB1 domain profile. 285 364 IPR000270 GO:0005515
Aev08g2570 745 MobiDBLite consensus disorder prediction 384 406 - -
Aev08g2570 745 ProSiteProfiles TPR repeat profile. 117 150 IPR019734 GO:0005515
Aev08g2570 745 PANTHER PROTEIN CLMP1 1 744 IPR044517 -
Aev08g2570 745 CDD PB1 287 362 - -
Aev08g2570 745 SMART PB1_new 285 364 IPR000270 GO:0005515
Aev08g2570 745 MobiDBLite consensus disorder prediction 1 33 - -
Aev08g2570 745 SUPERFAMILY CAD & PB1 domains 284 373 - -
Aev08g2570 745 Gene3D Tetratricopeptide repeat domain 438 617 IPR011990 GO:0005515
Aev08g2570 745 ProSiteProfiles TPR repeat profile. 43 76 IPR019734 GO:0005515
Aev08g2570 745 PANTHER PROTEIN PHOX4 1 744 - -
Aev08g2570 745 Pfam PB1 domain 285 362 IPR000270 GO:0005515
Aev08g2570 745 SUPERFAMILY TPR-like 39 164 IPR011990 GO:0005515
Aev08g2570 745 SMART tpr_5 81 116 IPR019734 GO:0005515
Aev08g2570 745 SMART tpr_5 43 76 IPR019734 GO:0005515
Aev08g2570 745 SMART tpr_5 502 535 IPR019734 GO:0005515
Aev08g2570 745 SMART tpr_5 117 150 IPR019734 GO:0005515
Aev08g2570 745 Gene3D Tetratricopeptide repeat domain 36 175 IPR011990 GO:0005515
Aev08g2570 745 SUPERFAMILY TPR-like 454 550 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2570 Aev-Chr8 24360491 24362823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2570 31 150 Calmodulin-binding Proteins AT3G25230 28.682 1.79e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2570 - - gmx:100805760 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1189 07 10307620 10309854 Aev08g2570 08 24360491 24362823 PCT