Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2553 ATGAAGTTAACCGGCGAAGACGGGGGCGCCGGTGGCCGGAAAGTTCTGGTCGGAGTGAAATTGGACCCTCGCAGCCGTGAATTGCTGACGTGGGCTCTCGTCAAGGTGGCGGAGCCCGGCGACATAGTCATTGCGCTTCACGTCCTTGACACCATCACCGAAGGAACATCATCGCTGCTATCTCTTGTGAAGACGTTTGATTCAGTTCTCTCGGTATATGAAGGCTTCTGCAATTTAAAGCAGGTTGGTTTGAAGCTGAAAGTGTGCAGAGGCGATTCGGCGCGGAAGGTTCTTGTGCAGGAAGCGACGTCGTTTGGCGTCGCGACGGTGATACTCGGAACTTCCAAAAAGCACCACACAATCCGGTCGCCGGCATCGGTTGCCAAGTACTGCGCGAAGAAATTGCCCAAGTGTGTCTCTGTCTTTGCTGTTGATAATGGCAAAATCGCGTTCCGAAGAGAAGCTTCTAGAATATGCAGTGATCAAGAGAAATTGCACGAGGTTCTAAACTTGTCACCAAAGTCGTTGGTGGCTTGTGGCACGAGAAACCTGAGGAGTTGTGAGAGTTGTGCACGGGTATTGCCACCACAAGAGGGTTCAGAAACTGATGAACATAAGGAAAATTGTCTAGCCTTGGTACCTTATCAAAAAGTTGATGATGCTCCTTCCCCTTGTTATTCAATCGTAGTGAGGAGTTCAAACCAATCCAAACCCGGTTGGTCCCTCATTCGCCAGGTGTTTCACCCAAAAAAGCATAACCCCAAGTCTTCACCGAAGAGTACAATTGTTTTTCAGCGCCCTTTCAAGCAGACCAGTTGGCATTCTTCAGCTGTAGTTCATCCAGATCATAAACAGACAAAATTTGATGACCAAAATGGCGGTTCAGCCCTTGATGGGGAGAGTGGTGCCATTGTTCCATTTGGATCTGCTTCTATATTCCCTCTTCCCTCCCTTTGCAGTGACTTGAGTACCCCTCCTGCAGAATTGTTGGATCTACGAGAGAAGTACTCGGCTTCATGCAGATCATATAGTTTGCAGGAACTTGCGTCTGCAACGGCAAACTTCTTACACGAAAATATGGTTGGCAAAGGTGGTAGTAGTTATGTTTATAGAGGGTGTCTTCCAGATGGCAAGGAATTGGCCGTGAAGATTTTGAAGCCGTCTGAAGATGTGGTAAAAGAGTTTGTTCAGGAGATTGAGATCCTTACAACTTTGGATCACAAGAACATAATATCTCTGTCCGGATTCTGTTTTGAGGACAACCATTTACTACTGGTTTACAATTTTCTGTCAAGGGGAAGCCTGGAAGAAAACCTACATGGCAATAAGAAGGACTGTAATGCATTTGGCTGGCTAGAGAGGTACAAGGTGGCCGTTGGTGTAGCCGAAGCATTGGACTATCTGCATAATGGCTGTGCACAGGCTGTTATCCATAGGGATGTAAAATCTTCAAATATCCTTCTCTCAGATGATTTTGAGCCTCAGCTCTCGGATTTTGGACTGGCTAGTTGGGGTTCTTCTTCTTCCCATATTACTTCTACTGATGTCGCCGGCACTTTCGGATACCTGGCTCCTGAATACTTTATGCATGGTAGAGTGACCGACAAAATCGATGTATATGCTTTTGGTGTTGTACTCCTTGAGCTTCTCTCAAATAGGAAGCCCATTAACAATGAATGCCCAAAGGGCCAGGAGAGCCTTGTTATGTGGGCTACACCAGTTTTGAAAGATGGGAAGCTATCCCATTTGCTTGATCCAAGCCTAGGCAGCGAATACGACCATTGCCAGATCAAAAGAATGGTTTTGGCTGCTACTCTCTGCATTAGACGAGCTCCTAAAACACGACCTCAAATGAGCCTTATATTGAAACTTCTGCGTGGTGATGAAGAAGTTACACGATGGGCAGAGCAAGAAGTTAACGCGCCAGAAGATCTTGAGGGACTTGATGGAGAATCAGTTCCAACTAATATTCAGTCCCATCTAAACCTTGCTCTGTTGGACGTGGAGGATGATGCAGTTTCTGTCAGCAGCTCCGAGCAGAACATCCTGCAACGCGATATTCCAGCAGCCAGCAGCTCATCCTCGCGCGCGTTCTACATAGATGAATCACATCATGATTATGTGCACTTTTTTTCTCTGCTGATACACCCTTCACATGTAATGGCTGTAAATGATGATATATATGGCAACTTAAACATAGGTGATCTTCCCTTGGAGCTAATTGATTTCGAGGACATCTTGAAGGAAGAGTCCCGGAAGAACACAGATTCATTGAGCAAATTATGCAGTCAATTATGCGTTCCACCTGATCCAATCGAGGATCTGGAATGGTTTCCAAGTTTCTTCGATGATTTAATAGCTTTGGACCTGAAAGACCTGGGACTTGTTCCGATTGATCCGGCTCATGATAAGCAATTCTATAATTTTCCGATCACTTTGGAGGGACAAGAAGATTTTAAATCTACGAATGATGTGAAACTTGTTGCAGATGCTCCGTCTTGTGGTAAGCAATCATACATTGATTATTTTCCTGTCACTCCGCAACTAAGGGAGAAGAAGTCGAAGAACATTGATAAAGATGTTATTGAACATGGTCTTCTTGGATTTACATGGAAGAAGAGAGCTAGGGCGAAAAATTACTATAAACGGCGGGAGAATGTGACGTGGATGAAGAAAAAGTGCAGCCATTGTGAAACTGATGAAACGCCACAATGGAGGAATGGACCTAAAGGGCCTAAAACACTATGCAATGCTTGTGGTGTGCGGTTCAAGTCAGCTTCTCCTTCTTCTTCTTCGTCGTTCGATTCTTCCAACGCCGCAAAGTTCTGGCTCCTCCATGGCATTGTTGCCGGAGTCGCTGTCGCAGCTGCGTTCGGCGCTCGCGCCTACTGGACCCGATTCAAGAAGTTTCGGAGCCGGGTCGTCGGAATCATACCCGCCCGATTCGCTTCGACCCGATTTCAGGGTAAGCCTCTCGTTCAAATCCTTGGCAAACCCATGATCCAGAGGACGTGGGAAAGGGCAAAGCTGGCAGCTACGTTGGATCATATTGTTGTGGCAACTGATGATGAAAAGATTGCTGACTGCTGTCGAAAATTTGGAGCTGATGTCGTAATGACATCAGAATCTTGCCGAAATGGTACTGAGCGCTGCAATGAAGCCCTAGAGAAGCTTGGTAGAAAATATGATATTGTTGTCAACATCCAGGGTGATGAGCCTTTAATTGAACCCGAAATAATCGATGGTGTTGTCAAAGCTTTGCAGGCGGCTCCAGATGCAGTGTTCAGCACTGCAGTCACATCTTTAAAGCCTGAAGACGCACACGACCCAAATAGAGTGAAATGCGTGGTAGATAACTGTGGTTATGCCATCTATTTTTCACGAGGATTAATCCCATTCAACAAGTCAGGGAAGGTCAATCAACAATACCCGTATTTGCTCCATCTTGGGATACAGAGCTACGATGCAAAGTTTCTAAAAATATATCCAGAGCTTCAGCCTACTCCATTGCAACTCGAGGAGGACTTGGAGCAGCTTAAAGTCCTTGAGAATGGCTATAAGATGAAGGTAATAAAAGTTGACCATGAAGCCCATGGTGTTGACACTCCTGAAGATGTTGAAAAGATAGAGTCTCTTATGCGCGAGAGGAACTTGTCTTGA 3660 0.4585 MKLTGEDGGAGGRKVLVGVKLDPRSRELLTWALVKVAEPGDIVIALHVLDTITEGTSSLLSLVKTFDSVLSVYEGFCNLKQVGLKLKVCRGDSARKVLVQEATSFGVATVILGTSKKHHTIRSPASVAKYCAKKLPKCVSVFAVDNGKIAFRREASRICSDQEKLHEVLNLSPKSLVACGTRNLRSCESCARVLPPQEGSETDEHKENCLALVPYQKVDDAPSPCYSIVVRSSNQSKPGWSLIRQVFHPKKHNPKSSPKSTIVFQRPFKQTSWHSSAVVHPDHKQTKFDDQNGGSALDGESGAIVPFGSASIFPLPSLCSDLSTPPAELLDLREKYSASCRSYSLQELASATANFLHENMVGKGGSSYVYRGCLPDGKELAVKILKPSEDVVKEFVQEIEILTTLDHKNIISLSGFCFEDNHLLLVYNFLSRGSLEENLHGNKKDCNAFGWLERYKVAVGVAEALDYLHNGCAQAVIHRDVKSSNILLSDDFEPQLSDFGLASWGSSSSHITSTDVAGTFGYLAPEYFMHGRVTDKIDVYAFGVVLLELLSNRKPINNECPKGQESLVMWATPVLKDGKLSHLLDPSLGSEYDHCQIKRMVLAATLCIRRAPKTRPQMSLILKLLRGDEEVTRWAEQEVNAPEDLEGLDGESVPTNIQSHLNLALLDVEDDAVSVSSSEQNILQRDIPAASSSSSRAFYIDESHHDYVHFFSLLIHPSHVMAVNDDIYGNLNIGDLPLELIDFEDILKEESRKNTDSLSKLCSQLCVPPDPIEDLEWFPSFFDDLIALDLKDLGLVPIDPAHDKQFYNFPITLEGQEDFKSTNDVKLVADAPSCGKQSYIDYFPVTPQLREKKSKNIDKDVIEHGLLGFTWKKRARAKNYYKRRENVTWMKKKCSHCETDETPQWRNGPKGPKTLCNACGVRFKSASPSSSSSFDSSNAAKFWLLHGIVAGVAVAAAFGARAYWTRFKKFRSRVVGIIPARFASTRFQGKPLVQILGKPMIQRTWERAKLAATLDHIVVATDDEKIADCCRKFGADVVMTSESCRNGTERCNEALEKLGRKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAHDPNRVKCVVDNCGYAIYFSRGLIPFNKSGKVNQQYPYLLHLGIQSYDAKFLKIYPELQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPEDVEKIESLMRERNLS* 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2553 1219 TIGRFAM kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 976 1207 IPR004528 GO:0008690
Aev08g2553 1219 SUPERFAMILY Nucleotide-diphospho-sugar transferases 974 1216 IPR029044 -
Aev08g2553 1219 ProSiteProfiles Protein kinase domain profile. 355 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2553 1219 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 9 679 - -
Aev08g2553 1219 Pfam Protein kinase domain 358 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2553 1219 Gene3D Phosphorylase Kinase; domain 1 327 429 - -
Aev08g2553 1219 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 141 - -
Aev08g2553 1219 PANTHER OS01G0253100 PROTEIN 9 679 IPR045271 GO:0004714|GO:0006468
Aev08g2553 1219 CDD CMP-KDO-Synthetase 973 1212 IPR004528 GO:0008690
Aev08g2553 1219 CDD ZnF_GATA 893 924 IPR000679 GO:0006355|GO:0043565
Aev08g2553 1219 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Aev08g2553 1219 CDD USP_Like 14 139 - -
Aev08g2553 1219 Gene3D - 885 941 IPR013088 GO:0006355|GO:0008270
Aev08g2553 1219 Pfam Cytidylyltransferase 976 1186 IPR003329 -
Aev08g2553 1219 SMART serkin_6 355 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2553 1219 ProSitePatterns GATA-type zinc finger domain. 894 919 IPR000679 GO:0006355|GO:0043565
Aev08g2553 1219 SUPERFAMILY Protein kinase-like (PK-like) 337 625 IPR011009 -
Aev08g2553 1219 ProSiteProfiles GATA-type zinc finger domain profile. 892 924 IPR000679 GO:0006355|GO:0043565
Aev08g2553 1219 Pfam GATA zinc finger 894 925 IPR000679 GO:0006355|GO:0043565
Aev08g2553 1219 Pfam Universal stress protein family 13 139 IPR006016 -
Aev08g2553 1219 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Aev08g2553 1219 SMART GATA_3 888 938 IPR000679 GO:0006355|GO:0043565
Aev08g2553 1219 Hamap 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 972 1214 IPR004528 GO:0008690
Aev08g2553 1219 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 891 925 - -
Aev08g2553 1219 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 964 1214 IPR029044 -
Aev08g2553 1219 Gene3D Transferase(Phosphotransferase) domain 1 430 642 - -
Aev08g2553 1219 Gene3D HUPs 12 145 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2553 Aev-Chr8 24198415 24209899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2553 343 625 Trihelix Transcription Factor Family AT1G70460 43.056 1.08e-69 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aev08g2553 CTP_transf_3 5.2e-55 CL0110
TF C2C2-GATA Aev08g2553 CTP_transf_3 5.2e-55 CL0110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2553 - - adu:107463283 1036.56