Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2547 ATGTCTGGAAAGGGGAAGAGGAAGGAGGAGCACGACAACGCTTCCGACGCCGACTCTGAAGGCCACGCGCCTCCCAGGAAATCCTCCAAAACCACCGATTCCGACGACGCTGATTCCATCGTTGTCTGCGAGGTTTTCTTCTTTGTCTTATTCACTTCACTTCACTCCCTTAAACCTTCCTACTGTGCTAGGATTTCGAAGAACAGGAGGGTTTCCGTGAGGAACTGGCAAGGCAAGATCATTGTCGACATTCGCGAGTTTTACGTTAAAGATGGCAAGCAGTTCCCTGGCAAAAAAGGTATCTCATTGACTATGGATCAGTGGAATGTGCTTCGTGGTCATATTGAAGAAATTGATAAGGCAGTTAACGAGAACTCTTAA 381 0.4751 MSGKGKRKEEHDNASDADSEGHAPPRKSSKTTDSDDADSIVVCEVFFFVLFTSLHSLKPSYCARISKNRRVSVRNWQGKIIVDIREFYVKDGKQFPGKKGISLTMDQWNVLRGHIEEIDKAVNENS* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2547 126 Pfam Transcriptional Coactivator p15 (PC4) 65 112 IPR003173 GO:0003677|GO:0006355
Aev08g2547 126 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 63 124 IPR045125 GO:0003713|GO:0060261
Aev08g2547 126 MobiDBLite consensus disorder prediction 1 36 - -
Aev08g2547 126 PANTHER BNAC09G47220D PROTEIN 63 124 - -
Aev08g2547 126 PANTHER BNAC09G47220D PROTEIN 1 45 - -
Aev08g2547 126 SUPERFAMILY ssDNA-binding transcriptional regulator domain 63 123 IPR009044 GO:0003677|GO:0006355
Aev08g2547 126 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 1 45 IPR045125 GO:0003713|GO:0060261
Aev08g2547 126 Gene3D Transcriptional Coactivator Pc4; Chain A 63 124 IPR009044 GO:0003677|GO:0006355
Aev08g2547 126 MobiDBLite consensus disorder prediction 1 34 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Aev08g2547 PC4 1.7e-23 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2547 K25815 - gmx:100820368 160.999