Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2532 ATGGGAGACGGCAACCGCGGGAACAACAGCGGCGGAGGAAGCAACAAGCCGGAGTGGCTTCAGCAGTACGATCTCATCGGCAAGATCGGCGAAGGTACCTATGGTCTCGTGTTCCTCGCGCGCATCAAGTCCGCCACCAATCGCGGCAAATCCATCGCCATCAAGAAATTCAAACAGTCCAAAGATGGCGACGGTGTCTCCCCCACCGCTATTCGTGAAATCATGCTGCTCAGGGAGATAACGCATGAGAATGTTGTGAAGCTTGCGAATGTGCACATCAATCATGCGGACATGTCTCTGTATCTTGCTTTTGATTATGCTGAGCACGACCTCTATGAAATAATTAGACATCATAGGGACAAAGTCAACCATTCCATTAATCAGTACACTGTTAAGTCGTTACTCTGGCAGTTGCTCAATGGACTAAATTATCTGCACAGTAATTGGATAGTACATCGAGATTTAAAGCCGTCAAACATATTGGTTATGGGTGAAGGGGAGGAACATGGTGTTGTTAAAATTGCCGACTTTGGACTTGCAAGGATATATCAAGCCCCTTTGAAGCCGTTATCTGAAAATGGGGTTGTTGTAACCATTTGGTATCGTGCACCTGAGTTGCTTCTTGGAGCAAAGCATTATACCAGTGCTGTTGATATGTGGGCTGTGGGGTGCATTTTTGCTGAGTTGTTGACCTTGAAGCCACTATTTCAAGGTGCAGAGGTCAAAGCTACACCAAATCCCTTTCAGCTTGATCAACTTGACAAGATATTCAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCGTTAGCAAATCTTCCACATTGGCAACAAGATGTGCAACATATACAAGGACACAAATATGACAATGCCAACCTCTATAACGTTGTCCACCTATCTCCCAAAAGTCCTGCATATGACCTATTGTCAAAGATGCTTGAATATGATCCTCGAAAGCGTATAACAGCAGCACAAGCTTTGGAGCATGAGTATTTCAAAATGGAACCACAACCTGGGCGGAATGCACTTGTACCCTGCCAACCGGGGGAGACATTTGTGAATTATCCCACACGTCCTGTGGACACAACAACTGATTTTGAAGGGACAACCAATATGCAACCTCCGCAGCAGGTTGCATCTGGAGCTGCAGTTTCTGGCAACATGGCTGCTGGTCATATTTCAAATAGATCTGTGCCTCGGCCAATGAATGTTGTTGGCATGCAAAGAATGCCTCATCAGGCGATGCAAGCTTATAATCTTACATCTCAGGCTGGGATGGGTGGTGGAATGAATCCCGGTGGCATCCCAATGCAAAGGGGCGTTCCACAGCAACACCAGCAGCAACAGTTGAGAAGAAAAGACCAAATGGGGATGCCAGGATATCCTCAACAGAAATCAAGACGTTATGCTGGCAGAGATCCAGTGAAGATACACAGTTGGGATCAACACTTGAGGAACTTCATTTTTGACAATTCAAGATCCCAAGGTTCAGATAGTTTGCCTTCATGTTGCGGATTTCTCTTCTTCCTATTGCGGTCAAAGGCCGGTTGCAATGAGCGCAAGAATCCGGACGCTATATTATGA 1587 0.4606 MGDGNRGNNSGGGSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSATNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLANVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNHSINQYTVKSLLWQLLNGLNYLHSNWIVHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLGHPTLEKWPSLANLPHWQQDVQHIQGHKYDNANLYNVVHLSPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFKMEPQPGRNALVPCQPGETFVNYPTRPVDTTTDFEGTTNMQPPQQVASGAAVSGNMAAGHISNRSVPRPMNVVGMQRMPHQAMQAYNLTSQAGMGGGMNPGGIPMQRGVPQQHQQQQLRRKDQMGMPGYPQQKSRRYAGRDPVKIHSWDQHLRNFIFDNSRSQGSDSLPSCCGFLFFLLRSKAGCNERKNPDAIL* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2532 528 Gene3D Phosphorylase Kinase; domain 1 14 104 - -
Aev08g2532 528 PANTHER CELL DIVISION PROTEIN KINASE 11 469 - -
Aev08g2532 528 Pfam Protein kinase domain 23 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2532 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Aev08g2532 528 ProSiteProfiles Protein kinase domain profile. 23 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2532 528 PANTHER CYCLIN-DEPENDENT KINASE E-1 11 469 - -
Aev08g2532 528 MobiDBLite consensus disorder prediction 447 471 - -
Aev08g2532 528 ProSitePatterns Protein kinases ATP-binding region signature. 29 56 IPR017441 GO:0005524
Aev08g2532 528 Gene3D Transferase(Phosphotransferase) domain 1 105 348 - -
Aev08g2532 528 SUPERFAMILY Protein kinase-like (PK-like) 18 335 IPR011009 -
Aev08g2532 528 CDD STKc_CDK8_like 22 333 - -
Aev08g2532 528 SMART serkin_6 23 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2532 Aev-Chr8 24059133 24064475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2532 16 469 Core Cell Cycle Gene Families AT5G63610 78.478 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Aev08g2532 Pkinase 2.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2532 K02208 - gmx:100813433 845.499