Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2520 ATGCAAGAAGATCACAAGAAGATGAAAGTGAAGAAAGGATGGCTCGCAGTACAAGTTGGATTAGAAGAAGAAGGATCATCATCATCATCAAAATCAAATGATAATAATAATCCTCAGAAATTCGTGATCCCAATTTGTTACCTTTACCATCCACTATTCAAGAGACTTCTAGACAGAGCATACGAGGTTTATGGGTACCACACGGATGGTCCTCTGAAACTCCCATGTTCTGTGGATGATTTCCTTCACCTACGTTGGAGAATTGAGAAAGAGTCTTCTTCTCTTCATCATACTCACCATCACCACCACCATCATCGTTTACCACATGCTCTCTCCTTCAACTCTTGCTTCGAAGGGATAATGGAATCAGCTATGGGAGATCTTTTAATGATGTCTAAAAACCTTGAGTCACAAGAATCCGCAAAGATTAGATTCACACCTGAACGTTTGTATACTCTGGATGAGCTCCTTTCTGATATCTATGTCAGACAGAGCCCAAAACCAATTGATTACCAAAATAGACTAGATCTTGTTCGGGTGTTCAATACCATGGCGCAGGAAATATATGGCCATAGCAATAGCTCCCCTGTCGTGGAAGGATATGGATCTTTTGTAATGGACATGTTCAGTGAAAAAAGTGATCTGGACATGTCTATCAATTTTGTTAATTCAACTGCAGTTGGTCGTCAGAAGAAGATTTCAACTCTTAGGAAGTTCATTAGGAAATTATACACAATTCAAAGAAAAGGACATATTACCAGTGTATCACTCATCACAGCCAGGGTGCCAATTATTAAACTTACTGATAGGGGTACAGGTATTGAATGTGATTTATCAGTCGAGAACTGGGATGGAATTGCAAAATCCCATATTATCCATGCTATTTCTGCCATAGATGAAAGGTTTCGGAAGCTATGTTTTCTGATGAAATCCTGGGCGCAAGTGCATAATATCAACAGTTCCAAAGACAGGACGTTGAATTCTTTTTCTATTGTATTGCTTGTTGCTTTTCATCTGCAGACTTGCAATCCTCCCATATTGCCTCCGTTCTCTGCTTTACTTAAAGATGGAGCTGACCCTGCATCTGTAATTAATGTTGTAAAAAGTTATTTAAACTACGGGAAAAGTAACAAGGACTCATTGGCTAAGCTTTTTATTAATCTTTTTGTCAAGCTAGCTTCAATTGAACAACTTTGGAAGAATGGTTTGTGTGTGAGCTTATTTAAAGGATCGTGGATTTCAAAATCATTGGATCATTCATACTCAATAACAATTGAGGACTTCACAGACCCGTCCCAAAACGTTGCGAGAGCAGTTGGAGCTGAAGAATTTAAGAAAATCTATGCCTGCATCCGTACCTCTCTGAACTACTTGGTGGAGTTTCTAAATGGCACGATGCAAGGCAAAGAATTTTTGGGCCTTTTTTTTCGTGCAACATTTGATTCTACTCCAGGAGTTGGGGGAACTAGCAACGCAAATTATAATTCGAATAACCATCTTACTTTGCTAGGTCCTCTGCACTCGAAGAAGAGGCATTTGGAAGAGGAAGGCTTAGCACAAAGTCAAGCTAAGAAACAAGCTCGGCAGGGTGCAAAACCGCAAGGAGTGGGTGGGATGCAACATGTTGGTAAAACTTTGCTTAATCCTGCATCTTTCACCCCACTAGCTGTCCACCAAAATCCTCTTTCAATTCCTAGAACACAACACATTGCTGTGCATCATCATGGTTATGGTCCAGGGATAGCACCTCCTCGTCTTGAAGGTCCTCATTTTCCGACGAGACAACCTCAGCTTTTCCCCTCCCAAACTTCCCAAAGTGTTGTTCAGTCTCCTCATTATCATGCTGCAAATGCAGTTGCTCCATCAGGAAACGGGGCATTCCGTCCGCACCTGCCTCTGGCAAGCCATCATAACCCATATGGAGGTCCATCGGGACCGCACCTGCCTCCGGCAAGCCATCATAACCCATATGGAGGAGACCATACGTGGCCTACTTACAGGACACATTAG 2010 0.4179 MQEDHKKMKVKKGWLAVQVGLEEEGSSSSSKSNDNNNPQKFVIPICYLYHPLFKRLLDRAYEVYGYHTDGPLKLPCSVDDFLHLRWRIEKESSSLHHTHHHHHHHRLPHALSFNSCFEGIMESAMGDLLMMSKNLESQESAKIRFTPERLYTLDELLSDIYVRQSPKPIDYQNRLDLVRVFNTMAQEIYGHSNSSPVVEGYGSFVMDMFSEKSDLDMSINFVNSTAVGRQKKISTLRKFIRKLYTIQRKGHITSVSLITARVPIIKLTDRGTGIECDLSVENWDGIAKSHIIHAISAIDERFRKLCFLMKSWAQVHNINSSKDRTLNSFSIVLLVAFHLQTCNPPILPPFSALLKDGADPASVINVVKSYLNYGKSNKDSLAKLFINLFVKLASIEQLWKNGLCVSLFKGSWISKSLDHSYSITIEDFTDPSQNVARAVGAEEFKKIYACIRTSLNYLVEFLNGTMQGKEFLGLFFRATFDSTPGVGGTSNANYNSNNHLTLLGPLHSKKRHLEEEGLAQSQAKKQARQGAKPQGVGGMQHVGKTLLNPASFTPLAVHQNPLSIPRTQHIAVHHHGYGPGIAPPRLEGPHFPTRQPQLFPSQTSQSVVQSPHYHAANAVAPSGNGAFRPHLPLASHHNPYGGPSGPHLPPASHHNPYGGDHTWPTYRTH* 670
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2520 669 MobiDBLite consensus disorder prediction 514 542 - -
Aev08g2520 669 SUPERFAMILY Nucleotidyltransferase 147 296 IPR043519 -
Aev08g2520 669 Pfam Auxin responsive protein 6 87 IPR003676 GO:0009733
Aev08g2520 669 Gene3D - 299 453 - -
Aev08g2520 669 SUPERFAMILY PAP/OAS1 substrate-binding domain 301 466 - -
Aev08g2520 669 CDD NT_PAP_TUTase 173 296 - -
Aev08g2520 669 PANTHER PROTEIN HESO1-LIKE ISOFORM X1 140 467 - -
Aev08g2520 669 MobiDBLite consensus disorder prediction 617 669 - -
Aev08g2520 669 PANTHER POLY A POLYMERASE CID PAP -RELATED 140 467 - -
Aev08g2520 669 Gene3D Beta Polymerase, domain 2 194 298 IPR043519 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aev08g2520 Aev-Chr8 23951015 23963204 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2520 10 96 Calmodulin-binding Proteins AT5G20810 37.931 1.92e-09 55.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2520 - - adu:107463220 542.347
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2520 08 23951015 23963204 Aev08g2520 08 23951015 23963204 ECH