Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2517 ATGGTGTTCTGCACCTGCTGCATGATCCCTACTAGTGAATTTTCCTTGGAGATCAAAAGGGCTTATATGTTTCAACCAAAGTTCTTGGGTTCTCTCAAAATATTGGCAAATTGGTTGATATTCCTCAATGCCTTGAGACTTAGTTATGCCATCACAGATCCTGATGTGGAAGGTGAAGCATTGGTTGAATTTCTCAGAGCACTCAATGATTCAAATAATCAAATTAGAGACTGGAATAATTATTTTGTGAGCCCATGCTATAGTTGGTCTAATGTCACTTGCAGCAACACACATGTTATATCTCTGAGCCTGGCATCAAATGGATTTTCTGGAACACTTTCTCCCTCAATTGTCAAATTAAAATACTTGGTTAGCTTGGAATTGCAGAACAATAACCTTGCAGGCCCTTTACCTGACTACATTGCCAACTTGACACACTTAGAATATCTGAACCTTGCTAACAATAATTTCAATGGTTCTATACCAGCTACATGGGGTCAACTCTCAAATTTAAAGCATCTGTTCTTGAGAGGGAATGACTTGTCTGGAAATGTTCCTAATACTTTTGCAAACCTTAGTGGCTTAGCAGAACTGGATCTTTCATCTAATGGTCTAACCGGAAGTATCCCAATGTCTCTCTTTTCAGTTCCAATATTTAATTTTTCAGATACACTTCTTCATTGTGGCTCTAGCTTTGAGCAACCTTGTGTTTCTAGTTCTGCACATCTAGCTTCAACCAACAAATCAAAACTAGCAGCTGTTGTTAGTTTTGCAAGTTGTGGTTCATTTGCACTCTTATGTCTTGGGGCTATCTTTGCATATAGATACCATCACATGCACAAACACAAAAGTGATGTGTTTTTTGATGTTTCAGGTGAAGATGAGAGTCAAATTTCCTTTTGGCAACTGAGAAGATTTTCTTGGCGTGAACTCCAGCTTGCAACTAAGAATTTCAGTGTAAGCAATGTAATTGGCCATGGAGGCTTTGGAAAAGTTTATAGAGGAGTGCTCTCAGATGGTACAAAAGTAGCCGTGAAGCGCCTCGCCGATTATCAGGCTCCTGGTGGAGAGGCTGCATTCCAAAGAGAAGTTCAACTCATAAGTGTTGCAGTTCACAAGAATCTGCTAAGATTAATTGGCTACTGCACAACCTCAACTGAAAGAGTTCTAGTATATCCCTTCATGGAAAACCGAAGCGTCGCGTATCGATTGAGGGAATTGAAGCCTGATGAGAAGGGCTTAGACTGGCCAATGAGGAAACGTGTGGCGTTCGGAACAGCCTATGGATTGGAGTATCTGCATAATCAATGCAATCCTAAGATCATACATCGCGATTTGAAGGCTGCGAATATTTTGCTAGATGATAACTTTGAAGCTGTTCTAGGAGATTTTGGGCTAGCTAAGCTGGTTGATACAAGGGTGACTCATGTTACAACTCAAGTGAGAGGCACAATGGGTCATATAGCACCAGAGTACTTGTCCACTGGAAAATCATCAGAGAAGACTGATGTGTTTGGCTATGGTATAACACTTCTTGAGCTAGTCACCGGTCAACGAACCGTAGACTTCTTTCGGCTTCAAGAGGAGGAGGATGTTCTTCTTCTTGATCATATAAAAAAGCTGATGAGGGAAAACCGACTGGACGACATAGTAGATAGGAACTTGAAAAAGTATGAGACCAAGGAAGTCGAAAGAATAATTCATGTAGCATTGCTTTGCACAAAAAGCTTGCCAGAGGAGCGTCCAAACATGTCAGAGATAGTGAAATTGCTGCAAGGAGAGGGATGGGGTGAATGGGAGGAGAAACAAGAAGATGAGAGAGAATACCTTGTGATTTTCGAAGCAGATGGAAGAAGCATGGATCCATGA 1869 0.4104 MVFCTCCMIPTSEFSLEIKRAYMFQPKFLGSLKILANWLIFLNALRLSYAITDPDVEGEALVEFLRALNDSNNQIRDWNNYFVSPCYSWSNVTCSNTHVISLSLASNGFSGTLSPSIVKLKYLVSLELQNNNLAGPLPDYIANLTHLEYLNLANNNFNGSIPATWGQLSNLKHLFLRGNDLSGNVPNTFANLSGLAELDLSSNGLTGSIPMSLFSVPIFNFSDTLLHCGSSFEQPCVSSSAHLASTNKSKLAAVVSFASCGSFALLCLGAIFAYRYHHMHKHKSDVFFDVSGEDESQISFWQLRRFSWRELQLATKNFSVSNVIGHGGFGKVYRGVLSDGTKVAVKRLADYQAPGGEAAFQREVQLISVAVHKNLLRLIGYCTTSTERVLVYPFMENRSVAYRLRELKPDEKGLDWPMRKRVAFGTAYGLEYLHNQCNPKIIHRDLKAANILLDDNFEAVLGDFGLAKLVDTRVTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRTVDFFRLQEEEDVLLLDHIKKLMRENRLDDIVDRNLKKYETKEVERIIHVALLCTKSLPEERPNMSEIVKLLQGEGWGEWEEKQEDEREYLVIFEADGRSMDP* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2517 622 Gene3D Phosphorylase Kinase; domain 1 287 394 - -
Aev08g2517 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Aev08g2517 622 Gene3D Ribonuclease Inhibitor 54 238 IPR032675 -
Aev08g2517 622 SUPERFAMILY L domain-like 58 220 - -
Aev08g2517 622 Gene3D Transferase(Phosphotransferase) domain 1 395 609 - -
Aev08g2517 622 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 34 605 - -
Aev08g2517 622 Pfam Leucine rich repeat N-terminal domain 56 95 IPR013210 -
Aev08g2517 622 SMART serkin_6 318 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2517 622 SMART LRR_typ_2 192 216 IPR003591 -
Aev08g2517 622 SMART LRR_typ_2 144 167 IPR003591 -
Aev08g2517 622 SMART LRR_typ_2 168 191 IPR003591 -
Aev08g2517 622 Pfam Protein kinase domain 319 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2517 622 SUPERFAMILY Protein kinase-like (PK-like) 296 591 IPR011009 -
Aev08g2517 622 PANTHER LRR RECEPTOR-LIKE KINASE 34 605 - -
Aev08g2517 622 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Aev08g2517 622 ProSiteProfiles Protein kinase domain profile. 318 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2517 622 Pfam Leucine rich repeat 146 205 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2517 Aev-Chr8 23924487 23928770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2517 39 603 Receptor kinase-like Gene Family AT5G65240 56.993 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aev08g2517 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2517 - - adu:107463312 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2517 08 23924487 23928770 Aev08g2517 08 23924487 23928770 ECH