LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev08g2515	ATGAATGCTTCTTCTCCCTCGTCACTTCCCATAGCCTACAAGGCATGGACAAGCCCAGCAGTCCCGGACTGGCTGAACAAAGGCGACAACGCATGGCAAATGGTGTCGGCAACTCTGGTCGGCATCCAGAGCATGCCCGGCCTCGTCATCCTCTACGGCAGCATCGTCAAAAAGAAATGGGCCGTCAACTCCGCCTTCATGGCCCTCTACGCCTTCGCCGCCGTCATCATCTGTTGGGTCACCTGGGCCTACAAGATGTCCTTCGGGAGGAAGCTTCTGCCCCTCTGGGGAAGGGCGGGTCCTTCCCTGGGGCAGAAGTTCCTCCTAGGGCAGGCAGCGCTGAATGCAACTACCCACTACTACCACAACCACACCGTGGTAGAGACGCCAGAGATAGATCCGTTTTATCCGATGGCGAGCATGGTGTGGTTCCAGTGCGTGTTCGCGGCGATCACGGTGGTGATACTGGCGGGGGCGGTGCTGGCGAGGATGAACTTCAAGGCGTGGATGATGTTTGTGCCGCTGTGGGTGACATTGTCCTACACCGTAGGGGCGTTCAGCTTGTGGGGCGGTGGCTTCTTGTTCCACTGGGGTGTCATCGACTATTCTGGCGGTTATGTTATTCATCTTTCGTCCGGGATTGCTGGATTCACTGCTGCTTATTGGGTGGGGCCAAGGCTGAAGAAGGACAGGGAGAGATTTCCACCAAACAATGTGTTACTAACGTTGGCAGGAGCAGGATTGCTGTGGCTAGGGTGGGCAGGATTCAACGGCGGAGATCCCTACTCAGCTAACATTGACTCATCTATGGCAGTCATCAATACGAACATAAGCGCCGCCACGAGCCTGCTCGTGTGGACATGGCTCGATGTCATCTTCTTCAAGAGGCCCTCTGTCATCGGAGCCGTTCAGGGCATGATCACTGGCCTTGTTTGCATCACCCCTGCCGCCGGTTTAGTTCAAGGATGGGCAGCAATAGTGATGGGAGTTCTATCAGGAAGTGTACCATGGTTCTCTATGATGATATTAGGCAAGAAACTAAAGATCTTCCAAATTGTTGATGACACCTTAGCAGTGTTCCACACACATGCTGTGGCAGGATTCCTAGGAGGCATCCTCACTGGCCTATTAGCAGAGCCACGCCTCTGTTCCCTCTTCCTCCCTGTCTCAAACTCCAAAGGTGCCTTCTATGGTGGCTCTGGTGGGGTCCAGGTCCTGAAACAGATTGTTGGGGGACTCTTCATCATTGCCTGGAACCTTGTTGCCACCTCAATCATTTGTGTGCTTGTCAATCTTGTTGTCCCATTGAGGATGTCTGATGAGGAGTTGCTGATTGGGGATGATGCTGTTCATGGTGAAGAGGCTTATGCTCTGTGGGGTGATGGTGAGAAGCTTAGTATCTATTCAGAAGAGACCACTCACCATGGCTATGGACTAGTCTTGGCATCAAGTGGTGCCACTCAAGTTGTCTAG	1473	0.535	MNASSPSSLPIAYKAWTSPAVPDWLNKGDNAWQMVSATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVIICWVTWAYKMSFGRKLLPLWGRAGPSLGQKFLLGQAALNATTHYYHNHTVVETPEIDPFYPMASMVWFQCVFAAITVVILAGAVLARMNFKAWMMFVPLWVTLSYTVGAFSLWGGGFLFHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKKDRERFPPNNVLLTLAGAGLLWLGWAGFNGGDPYSANIDSSMAVINTNISAATSLLVWTWLDVIFFKRPSVIGAVQGMITGLVCITPAAGLVQGWAAIVMGVLSGSVPWFSMMILGKKLKIFQIVDDTLAVFHTHAVAGFLGGILTGLLAEPRLCSLFLPVSNSKGAFYGGSGGVQVLKQIVGGLFIIAWNLVATSIICVLVNLVVPLRMSDEELLIGDDAVHGEEAYALWGDGEKLSIYSEETTHHGYGLVLASSGATQVV*	491

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev08g2515	490	PRINTS	Rhesus blood group protein signature	326	344	IPR002229	GO:0005887
	Aev08g2515	490	PRINTS	Rhesus blood group protein signature	240	258	IPR002229	GO:0005887
	Aev08g2515	490	PRINTS	Rhesus blood group protein signature	145	161	IPR002229	GO:0005887
	Aev08g2515	490	PRINTS	Rhesus blood group protein signature	271	293	IPR002229	GO:0005887
	Aev08g2515	490	Pfam	Ammonium Transporter Family	31	456	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Aev08g2515	490	Gene3D	Ammonium transporter AmtB like domains	7	459	IPR029020	-
	Aev08g2515	490	ProSitePatterns	Ammonium transporters signature.	201	226	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Aev08g2515	490	PANTHER	AMMONIUM TRANSPORTER MEP2	20	466	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Aev08g2515	490	PANTHER	AMMONIUM TRANSPORTER	20	466	-	-
	Aev08g2515	490	TIGRFAM	amt: ammonium transporter	29	456	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Aev08g2515	490	SUPERFAMILY	Ammonium transporter	24	438	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev08g2515	Aev-Chr8	23908162	23911423	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev08g2515	138	466	Inorganic Solute Cotransporters	AT2G38290	70.517	3.19e-166	472

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev08g2515	K03320		-	gmx:100785993	849.736