Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2496 ATGGGAAGATCTCCTTGTTGTGAGAAAGAGCACACGAACAAAGGAGCTTGGACCAAAGAGGAAGATGAACGCCTCATCAACTACATCAAGCTTCACGGTGAAGGCTGTTGGAGATCTCTCCCCAAAGCTGCCGGGTTGCTTAGATGTGGCAAGAGCTGTAGGCTGAGATGGATAAATTACCTGAGGCCTGATCTCAAGAGAGGCAACTTCACCGAAGAAGAAGATGAGCTCATCATTAACCTCCACAGTTTACTTGGCAACAAATGGTCTTTAATTGCTGCAAGGTTACCGGGAAGAACCGACAATGAGATAAAGAATTATTGGAACACTCATATCAAGAGAAAACTCTATAGCCGCGGAATCGACCCCCAAACCCACCGCCCACTCAACCCCACTGTAACCGCAACCGCAACTGCAACCGCAATCTCACTGGCTGTAACAACCAACAAGAAAACGATCAACAATGATAACAACATTAGCATTAACAACACCAATAATGGATTTCAATTGGTGAGTGGAAGTGGCTATGCAAATAATAATAATAATAATACAAAGATTATTGTTGGAAGCGAAATATTGGTTCGTGAAGACTCATCAAATAGTAGCAGTGGCGTCACAACAGAATATGATCCTCCTCCTCCTCATCCCAATAATAATAATCAACAACAAATCAACTTGGACCTTTCAATTGGGCTTCCCTCTCAAGAAAACAACAAGAAGGTGAAAAAGGAAGAACAAGAAGAAGAAGAAGAAGCGAAACCAGGTGGTGTTTTGTATAAGTGGTATGGTAACAATAATAATGTTAGGGGTCAACAAGGTTTGTGCTTGTGTTATGGTCTAGGGTTTCAAAGTAACCAACCTAATTGTAATTGCAAACCCATTGCTGCTCCTCCTACTACTACTACTACAACCGCCGCTGATCATAGTATTAATCATTTGTATAGATTTTGCAGACCTATGAATATTTAG 969 0.4149 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNPTVTATATATAISLAVTTNKKTINNDNNISINNTNNGFQLVSGSGYANNNNNNTKIIVGSEILVREDSSNSSSGVTTEYDPPPPHPNNNNQQQINLDLSIGLPSQENNKKVKKEEQEEEEEAKPGGVLYKWYGNNNNVRGQQGLCLCYGLGFQSNQPNCNCKPIAAPPTTTTTTAADHSINHLYRFCRPMNI* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2496 322 Gene3D - 68 132 - -
Aev08g2496 322 CDD SANT 69 112 IPR001005 -
Aev08g2496 322 SMART sant 13 63 IPR001005 -
Aev08g2496 322 SMART sant 66 114 IPR001005 -
Aev08g2496 322 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev08g2496 322 CDD SANT 16 61 IPR001005 -
Aev08g2496 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aev08g2496 322 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev08g2496 322 Gene3D - 14 66 - -
Aev08g2496 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aev08g2496 322 MobiDBLite consensus disorder prediction 197 222 - -
Aev08g2496 322 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Aev08g2496 322 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 253 - -
Aev08g2496 322 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Aev08g2496 322 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev08g2496 322 PANTHER TRANSCRIPTION FACTOR MYB7 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2496 Aev-Chr8 23786956 23788213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2496 1 172 MYB Transcription Factor Family AT4G38620 69.061 5.50e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev08g2496 Myb_DNA-binding 4.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2496 K09422 - gmx:100808083 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2496 08 23786956 23788213 Aev08g2496 08 23786956 23788213 ECH