Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2465 ATGGACCCCGATGCATTCACCACAAGTCTCTTCAAGTGGGACCCACGCGCCATCCTCCCATCTCCTCCTCCTCCACCCACAAGGCCGACGACGCTGCTCGACTACACGGTGGCGCCTCCATCCTCGGCGGGGTTCCCGGGGGCGAGGAGGGAGGTGGTGGTAGGGGGTCTGGAGGAGCTGTTCCAGGCGTACGGGATAAGGTACTACACGGCGGCCAAGATAGCGGAGCTTGGCTTCACGGTGAACACGCTGGTTGACATGAAGGACGATGAGCTTGATGACATGATGACCACCGTGTCCCAGATTTTCCGGTGGGACCTACTCGTCGGAGAGAGGTACGGCATCAAGGCCGCCGTGAGGGCCGAGCGGAGGCGCCTCGATGAAGAGGATGCCGCTAGGCGACGCAACATCCTCTCCACCACCGACACCACCACCAACGCCCTTGACGCTCTCTCTCAAGAAGGGTTATCGGAGGAACCGGTGGTGCAACAAGAGAAGGAGGCGGTGGGGAGCGGAGGGGGAGGGAGCACGTGGGAGGTGGTTGGTGGTGAAGAGAGGAGGAAGCAGCAGCAGCAAAGGAGGAAGAGGAGGAGCAATAATAAGTTGAAGGGTAGGGTTCAGCATGAGGAGGAGGAGGAAGATGATGAAGAGGATGATAGAGAAGAGGATAATAACATTATTGAAGGAGGAAATGGGAATGGGCATGGTGAGAGGCAAAGGGAACACCCTTTCATAGTGACGGAGCCTGGGGAGGTTGCACGTGGCAAGAAGAACGGCCTTGATTATCTGTTTCACCTCTATGACCAATGCCGTGACTTCTTGATCCAGGTTCAAGCCATTGCCAAGGACCGAGGTGAAAAATGCCCCACCAAGGTGACGAATCAAGTGTTCAGGTACGCAAAGAAGGCAGGTGCGAGCTACATCAACAAGCCGAAGATGCGACACTACGTGCACTGCTACGCCTTACACTGCCTGGACGAGCAAGTCTCCAACGAGCTGCGTAGGGCTTTCAAGGAGCGAGGCGAGAACGTCGGCGCCTGGAGGCAAGCCTGTTACAAGCCCCTCGTTGCCATCGCCGCCCGCCAGGGTTGGGACATCGACGCCATTTTCAATTCCCACCCTCGCCTCTCCATTTGGTACGTCCCCACCAAGCTCCGCCAGCTTTGTCACGCCGAGAGGAACACCGCTGCTGCCGCCGCCGCTGCTGCTTCTACCTCCGTCTCCCTCGCCACTGGCCACCTTCCTTTCTAA 1251 0.5827 MDPDAFTTSLFKWDPRAILPSPPPPPTRPTTLLDYTVAPPSSAGFPGARREVVVGGLEELFQAYGIRYYTAAKIAELGFTVNTLVDMKDDELDDMMTTVSQIFRWDLLVGERYGIKAAVRAERRRLDEEDAARRRNILSTTDTTTNALDALSQEGLSEEPVVQQEKEAVGSGGGGSTWEVVGGEERRKQQQQRRKRRSNNKLKGRVQHEEEEEDDEEDDREEDNNIIEGGNGNGHGERQREHPFIVTEPGEVARGKKNGLDYLFHLYDQCRDFLIQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEQVSNELRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNSHPRLSIWYVPTKLRQLCHAERNTAAAAAAAASTSVSLATGHLPF* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2465 416 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 231 397 IPR035209 GO:0003677
Aev08g2465 416 MobiDBLite consensus disorder prediction 210 224 - -
Aev08g2465 416 PANTHER PROTEIN LEAFY 1 405 IPR002910 GO:0003677|GO:0006355
Aev08g2465 416 MobiDBLite consensus disorder prediction 153 240 - -
Aev08g2465 416 Gene3D Protein LEAFY 234 403 IPR038276 -
Aev08g2465 416 Coils Coil 199 219 - -
Aev08g2465 416 Pfam Floricaula / Leafy protein SAM domain 54 130 IPR035079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2465 Aev-Chr8 23545019 23548799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2465 1 395 Orphan Transcription Factor Family AT5G61850 63.235 1.95e-155 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Aev08g2465 C_LFY_FLO 1.1e-108 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2465 - - gsj:114416001 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2465 08 23545019 23548799 Aev08g2465 08 23545019 23548799 ECH