Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2463 ATGTCGGCTATGGTTTCTGCCCTCACTCAAGTCATTGGTGGAGGCACTAACAATAATAATCATAATAATAATAATAATAATATTAATATTAATGATCCTTCATCAATTCAGCTTCATCATGATGATAATAACACTTTAAACACTTGTCATGACTCCACCACAATCCACAACAATCAACAATCTCAACAACCAAACCAAGACCAAGGAAACATAAGAAGAAGACACTATAGAGGAGTGAGGCAAAGGCCATGGGGGAAATGGGCAGCTGAGATTCGAGATCCTCAGAAAGCAGCAAGAGTATGGCTTGGAACATTCGAAACTGCTGAAGCTGCTGCTCTTGCTTATGATGAAGCTGCACTCAGATTCAAAGGAAGCAAAGCTAAGCTCAATTTCCCTGAACGAGTTCAGGGAAATATTATTGCCGAATTCATGAGTGATCACATCACAAATCGTCGTCATCAAAATCATCATCAAGCAGTTTCTCTTGCTCCTCCTCCTCCTCCTCAATTTTCTCCAGAAACAACACTTTCATTCAATAATATTTCTTCAACATTTCAATATCATCCTCAAGTTATGATGGGAAGTGGGAGTAGTAATAATAGCTTTGGTGGTTATGATATGCATCATAGTAATTTTTATGGGAAAGATCATCACATGTTTGTTGCTTCTTCAAATTCTCAACCTCAATTCTCATCTTCATCTTCTTCATCTTCCGGAATAACTCACCAAGATCAAGAGTTTTTAGGATTCTCTATGCAATTCAGAGGTTCTTCTTCCGATACTAACCCTAATAGGAATTGGATGAATGATGACGACAATGATGGAAGATAG 831 0.3791 MSAMVSALTQVIGGGTNNNNHNNNNNNININDPSSIQLHHDDNNTLNTCHDSTTIHNNQQSQQPNQDQGNIRRRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDEAALRFKGSKAKLNFPERVQGNIIAEFMSDHITNRRHQNHHQAVSLAPPPPPQFSPETTLSFNNISSTFQYHPQVMMGSGSSNNSFGGYDMHHSNFYGKDHHMFVASSNSQPQFSSSSSSSSGITHQDQEFLGFSMQFRGSSSDTNPNRNWMNDDDNDGR* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2463 276 ProSiteProfiles AP2/ERF domain profile. 75 132 IPR001471 GO:0003700|GO:0006355
Aev08g2463 276 MobiDBLite consensus disorder prediction 224 276 - -
Aev08g2463 276 SUPERFAMILY DNA-binding domain 75 133 IPR016177 GO:0003677
Aev08g2463 276 MobiDBLite consensus disorder prediction 224 266 - -
Aev08g2463 276 MobiDBLite consensus disorder prediction 14 69 - -
Aev08g2463 276 PANTHER DNA-BINDING DOMAIN 1 271 IPR044808 GO:0003700|GO:0009873
Aev08g2463 276 Pfam AP2 domain 75 124 IPR001471 GO:0003700|GO:0006355
Aev08g2463 276 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF115-LIKE 1 271 - -
Aev08g2463 276 Gene3D AP2/ERF domain 74 134 IPR036955 GO:0003700|GO:0006355
Aev08g2463 276 MobiDBLite consensus disorder prediction 14 79 - -
Aev08g2463 276 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Aev08g2463 276 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Aev08g2463 276 SMART rav1_2 75 138 IPR001471 GO:0003700|GO:0006355
Aev08g2463 276 CDD AP2 75 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2463 Aev-Chr8 23533121 23535085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2463 1 136 AP2-EREBP Transcription Factor Family AT5G61890 64.286 2.77e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev08g2463 AP2 2.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2463 - - gmx:100787091 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2463 08 23533121 23535085 Aev08g2463 08 23533121 23535085 ECH
Aev03g2993 03 29004143 29005299 Aev08g2463 08 23533121 23535085 PCT