Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2455 ATGGCATCATCGGAGGTTTCCATGAAAGGGAATTGTCACAGCACCGATTGTAGTAGGAACGGTACGGACACTCAGAATGTTCATTCATCTTCCACAGCTAAAGAAGCGGAAGCTGCACTTTATAGGGAGCTATGGCATGCGTGTGCAGGTCCTCTTGTTACAGTGCCCAGAGAAGGAGAAAGAGTCTTCTATTTCCCTCAGGGACATATAGAGCAGGTGGAGGCGTCAACAAATCAGGTGGCGGACCAACACATGCCCGTGTACGATCTTCCTTCTAAGATCCTCTGTCGGGTCATCAACGTGCAGCTCAAGGCTGAGCCCGACACAGATGAGGTTTTTGCTCAGGTTACTTTACTTCCCGAGCAGAATCAAGATGAGAACGCGGTGGAGAAAGAGCCTCCTCCGCCACCGCCGCCACGGTTCCATGTGCATTCATTCTGTAAGACTCTAACGGCATCCGATACAAGTACTCATGGTGGGTTTTCTGTGCTGAGGCGGCATGCTGATGAGTGCCTTCCTCCCCTGGACATGTCAAAGCAGCCGCCCACCCAGGAATTGGTGGCTAAGGATTTACATGCTAATGAATGGCGATTCAGACATATTTTCAGGGGTCAACCTCGCAGACACTTGCTTCAAAGTGGTTGGAGTGTTTTTGTCAGCTCCAAGAGGCTGGTTGCTGGGGATGCCTTTATATTTCTAAGAGGGGAGAACGGGGAGCTCCGTGTCGGTGTTCGACGAGCAATGAGACAGCAGGGAAATGTTCCTTCCTCGGTTATCTCTAGTCACAGTATGCACCTTGGGGTCCTTGCAACTGCTTGGCATGCCATTTTGACGGGGACTATATTCACGGTTTATTACAAGCCAAGAACCAGTCCCTCTGAATTTATAGTTCCATATGACCAATATATGGAGTCTCTCAAAAACAATTATACCATTGGGATGCGCTTCAAAATGAGGTTTGAAGGCGAAGAGGCCCCAGAACAGAGGTTTACTGGTACCATTGTTGGAATAGAAGATTCTGACACCAAAAGGTGGCCTGAATCCAAATGGAGAAGCCTCAAGGTGAGATGGGATGAAACATCTAACATACCTCGTCCTGAAAGAGTATCCCCTTGGAAAATAGAGCCTGCTCTTGCTCCTCCAGCTATGAACCCTCTCCCAATGCCCCGGGCTAAAAGGCCTAGATGTAATGCAGTTCAATCATCCCCAGATTCCTCTGTTCTTACCCGAGAAGTATCATCTAAAGCAAGCGTAGACCCTTCACCGCCAAATGGATTCCCGAGGGTCTTGCAAGGTCAAGAATTTTCGACCTTGAGAGGCAATTTTGCAGAAAGCAATGAGTCTGACACTGCTGAGAAGTCTGTTGTTTGGCCACCTGCTATAGATGATGAGAAGGTTGATGTTATTTCTACTTCTCGGAGGTTAGGATCAGAGTCCTGGATGTCAATGGGAAGGCATGAGACGACATATTCAGATCTTCTTTCAGGCTTTGGGACCAGTGGAAATCCTTCACATCCTTCCTTGGTTGATCAAATGGGCGCTGTAGCTTATCCTGCTAGAAAGCATTCGTCAGATCACGAAGGCAAACTTAATGTGCATCATCCATGGCCTGTAATGCCCTCTAGTCTATCACTAAACCTCTTGGATTCTAACACTAAAAGTTCTCCACGTGGTGTTGAATCACCTTACCAAGCTCGAGGGAATTTGAGGTATAGTGCATTTGGTGAATATCCTGTGCTTCATCATGGTAATAAAGCTGAGCATCCTCATGGAAACTTGATGCCACCCCCACCTCCATCTCAATATGAGAGTCCCTTGTCAAGAGAGCTTATGTCCAAGCCATTATCAGTGAAAACTTGCGAGACTGTGAAACCAAAAGATGGTGACTGTAAGCTATTCGGCATCTCACTTATCAGTAGCCCCACTGCACCAGAGCCTTCTGTATCACAAAGAAATGTGACTAGTGAGTCAACTGGTCAAATGCATCTTGCATCACACCAACAACATGCTTCCAAGAATGATCAGAAATCAGAACATTCAAAGGGCTCCAAACCGGCAGAGGGCCCTCTTGTTATTGATGACCATGAAAAGCCATTACATACTTCTAAGGTGCATCTTAAAGATATTCAGGCCAAACCCCCCAGTGGTTCTGCTAGGAGTTGCACCAAAGTTCACAAGAAGGGGATTGCACTTGGTAGGTCAGTTGACCTTACAAAGTACAGCAACTATGATGAATTGGTTGCTGAATTGGATCGGCTGTTCGAATTTGGAGGTGAACTCATGTCGCCCAAAAAGGATTGGCTTATCGTGTACACTGATGATGAGGGTGACATGATGCTTGTTGGGGATGATCCATGGCAGGAGTTCTGTGCCATGGTACGCAAAATTTATATCTACCCCAAAGAGGAGATTCAGAAAATGAGCCCTGGTACTTTAAGTTCTAAAAATGAAGAGAACCAATCAGGTAGTGAAAGTGCAGATGCAAAAGAAGTTAAAAGCCAGCTGCGTCACAAGTTAAATTCTGAAAATGGTGACACCCAATAA 2544 0.4646 MASSEVSMKGNCHSTDCSRNGTDTQNVHSSSTAKEAEAALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQHMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEQNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPSEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDTKRWPESKWRSLKVRWDETSNIPRPERVSPWKIEPALAPPAMNPLPMPRAKRPRCNAVQSSPDSSVLTREVSSKASVDPSPPNGFPRVLQGQEFSTLRGNFAESNESDTAEKSVVWPPAIDDEKVDVISTSRRLGSESWMSMGRHETTYSDLLSGFGTSGNPSHPSLVDQMGAVAYPARKHSSDHEGKLNVHHPWPVMPSSLSLNLLDSNTKSSPRGVESPYQARGNLRYSAFGEYPVLHHGNKAEHPHGNLMPPPPPSQYESPLSRELMSKPLSVKTCETVKPKDGDCKLFGISLISSPTAPEPSVSQRNVTSESTGQMHLASHQQHASKNDQKSEHSKGSKPAEGPLVIDDHEKPLHTSKVHLKDIQAKPPSGSARSCTKVHKKGIALGRSVDLTKYSNYDELVAELDRLFEFGGELMSPKKDWLIVYTDDEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEENQSGSESADAKEVKSQLRHKLNSENGDTQ* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2455 847 MobiDBLite consensus disorder prediction 641 668 - -
Aev08g2455 847 MobiDBLite consensus disorder prediction 380 427 - -
Aev08g2455 847 MobiDBLite consensus disorder prediction 807 847 - -
Aev08g2455 847 MobiDBLite consensus disorder prediction 1 30 - -
Aev08g2455 847 Pfam B3 DNA binding domain 146 247 IPR003340 GO:0003677
Aev08g2455 847 MobiDBLite consensus disorder prediction 822 847 - -
Aev08g2455 847 MobiDBLite consensus disorder prediction 669 693 - -
Aev08g2455 847 SUPERFAMILY CAD & PB1 domains 722 796 - -
Aev08g2455 847 Pfam AUX/IAA family 765 806 IPR033389 -
Aev08g2455 847 Gene3D - 715 808 - -
Aev08g2455 847 ProSiteProfiles B3 DNA-binding domain profile. 146 248 IPR003340 GO:0003677
Aev08g2455 847 SUPERFAMILY DNA-binding pseudobarrel domain 142 275 IPR015300 -
Aev08g2455 847 MobiDBLite consensus disorder prediction 398 420 - -
Aev08g2455 847 Pfam Auxin response factor 272 354 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev08g2455 847 MobiDBLite consensus disorder prediction 807 821 - -
Aev08g2455 847 ProSiteProfiles PB1 domain profile. 719 801 IPR000270 GO:0005515
Aev08g2455 847 Gene3D - 143 248 IPR015300 -
Aev08g2455 847 SMART B3_2 146 248 IPR003340 GO:0003677
Aev08g2455 847 MobiDBLite consensus disorder prediction 583 607 - -
Aev08g2455 847 MobiDBLite consensus disorder prediction 641 693 - -
Aev08g2455 847 CDD B3_DNA 144 246 IPR003340 GO:0003677
Aev08g2455 847 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 25 826 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev08g2455 847 Gene3D - 309 379 - -
Aev08g2455 847 PANTHER AUXIN RESPONSE FACTOR 2 25 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2455 Aev-Chr8 23424367 23428374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2455 1 841 B3 DNA Binding Superfamily AT5G62000 65.714 0.0 1112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev08g2455 AUX_IAA 6e-11 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2455 - - aip:107612759 1422.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2455 08 23424367 23428374 Aev08g2455 08 23424367 23428374 ECH
Aev03g3001 03 29066931 29071130 Aev08g2455 08 23424367 23428374 PCT
Aev08g2455 08 23424367 23428374 Aev01g1898 01 23988898 23990949 PCT