Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2444 ATGGCAGCTTTTTCATCTTCATACCAATACCACCCTTTTCTCTTTGACTCTGCATTAATCTTGTCCAATAATAATAATATAAACACTACTACATCCCCTGTTTCTTCTTCTCCTCCTCCTCTTCCTCTGTCTCAGTTTTACCTTCAAAATCATCATCATGAGGCATATTTCAATAATAATAATTATAATAATAATCAGCAAGATCAGACTATTACAGTAAGCTGTGTTGATCAAAGCTCAAAGGCTTCCATGATCAGTAGTGACAATGAGCCTTCTGTGACCAAAAACCTTAGCCCTCAGTCTTCCATGGTTGTTGACAAGCTTGAAACAGGGGATGAACAGGTCACTCAGAAGCTGATGACTCCTATGGACATCAGGAAGAGGAGAATTAGACATGGATCTTCCTTCAACAACCCCCAATCTAAGGATGGGACAGAGGAGAAGAGCAAGAAAATGAGGAAGAGCAACAACAATAATAATAATAATAATAATGGTGAAGGGGTGAAGAAAGAAGAGGAGAAAGGAAAAAAAGCAGAGAAGAAGAAGAAAGGTAGTGATGAAGAGCCTCCAACAGGATACATCCACGTCAGAGCTAGAAGGGGTCAAGCAACTGATAGCCATAGCCTTGCTGAAAGGGTGAGAAGAGAGAAAATTAGTGAGAGGATGAAGATGTTGCAGCGGCTTGTGCCAGGCTGTGATAAGGTAACTGGAAAGGCCCTTATGTTGGATGAAATAATCAATTATGTTCAGTCTTTACAGAATCAAGTAGAGTTCTTGTCAATGAAGCTTGCTTCAGTGAATCCAATGTTCTATGACTTGGCATCAGACATAGACACCCTCTTGGTTAGACCAGAGAAATTGAATAATAATAATAGCATAACATCAGCAGCAATATCTGTGGCACCACATTGCAGCACAACTTTTGCTGATACAACAACAACCACCACCACCATGACCATATTCCCCCAAACTAATGACTATGTTTTGGATAATTCAGCTTCAATTTTTCTCCAACAAGGGCAGAGATCAAATAATGTTTTCTCTGAGGATAGTGGTAGTCATTTCTGGGAAGCAGAAGAGCAAAGACAAAAGTTTCTTCATCCTTACGGATTCATTAACAACAACTTATGTTCCTTTCATTAA 1143 0.3937 MAAFSSSYQYHPFLFDSALILSNNNNINTTTSPVSSSPPPLPLSQFYLQNHHHEAYFNNNNYNNNQQDQTITVSCVDQSSKASMISSDNEPSVTKNLSPQSSMVVDKLETGDEQVTQKLMTPMDIRKRRIRHGSSFNNPQSKDGTEEKSKKMRKSNNNNNNNNNGEGVKKEEEKGKKAEKKKKGSDEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDLASDIDTLLVRPEKLNNNNSITSAAISVAPHCSTTFADTTTTTTTMTIFPQTNDYVLDNSASIFLQQGQRSNNVFSEDSGSHFWEAEEQRQKFLHPYGFINNNLCSFH* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2444 380 Coils Coil 168 188 - -
Aev08g2444 380 MobiDBLite consensus disorder prediction 166 208 - -
Aev08g2444 380 Gene3D - 199 272 IPR036638 GO:0046983
Aev08g2444 380 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 380 IPR024097 GO:0006355
Aev08g2444 380 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 1 380 - -
Aev08g2444 380 CDD bHLH_AtBPE_like 192 277 - -
Aev08g2444 380 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 200 269 IPR036638 GO:0046983
Aev08g2444 380 SMART finulus 208 258 IPR011598 GO:0046983
Aev08g2444 380 Pfam Helix-loop-helix DNA-binding domain 206 253 IPR011598 GO:0046983
Aev08g2444 380 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 202 252 IPR011598 GO:0046983
Aev08g2444 380 MobiDBLite consensus disorder prediction 107 208 - -
Aev08g2444 380 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2444 Aev-Chr8 23341027 23343000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2444 160 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 60.345 3.01e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev08g2444 HLH 2.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2444 - - gmx:100806696 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2444 08 23341027 23343000 Aev08g2444 08 23341027 23343000 ECH