Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2442 ATGAATGCCCAGAAGGTTAAGGAGAACTTGCCGCTTAGCGGTAATGGTGATCGGTTGTGGGAGGTCAAGTCCAACCGCATGGAAGTTCTTAGCCATCCGAACCGGGTGGAGAAACTGAAGCGAAGCCTTATCGGGTCGACAAAAAATCCGATGAGCTTTAACAAGACACGTCTACTGGTGGAAGAATTGGGGATGAATGGGGAGAGGTGGTGTGCAGTGAAGCAGGGGCGTTCAATCATGATAACATTTGGGTCAGTTGAGCTCATGCACATGGCTCTTGAGTCTGAGTCCATGCTCAATATATTCGAGGATGCATGGAGTGAGGATACTTTTGTTCAATTGGGAAGTTATGGGGTAATGTTGTTACGGTTGATGACATCCCAGGAGATTGGAAGGGACATGTATGGCTTCCAAAGCTTTGCACATCTGGTTAATGAGGATGCTTCTGAGAAGGAAGGATCGGTGGGGTTCGAAGCTATCGATGGGGTGGATGCGATCGCAGAAAACGGTGGACTGCCGGATAGGGGAAGTTTGAAGGGTATGCTGCATTGCTTGACGCCAACTTCTGCATCTGTTACTAAATCCTCTGCATGCAAGATGGGTGATGGCCACCAACATGGAAACGGTAGGCATACAATGGACTACTACAGAGGAGCACATTCACCTTGGAATATGGCTTCCCAGCATCAAGCAAAGGAACCAAATGCACTAGTTTTGAATAAGAAAATTAGGTCCATTATGGCTGAGCGTGCAATGATAGAACTAGACATTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCTAGAGATGAGGCCCTTCGGCAGAGGGATGAAGCACTTGCTCAGAGGGATAATGCCCTAAGGGAACGAGATAATGCCCTTGCCGCCCTTCAAACTCGGGAAAAGGCTGTCAACTTCTCCTTAGGTCGACGTGGATCAAAGCGATTGCTCCATCCTGCAAACTATCCAGATAACATGTCAGAAGCCGCATACAGCACAAAGGATGTGCCAATAACCGATGCTTTCCCAGTACCTTTTGTACCTTCGGACGCCATCAAATCCCATCGAGCTAAGAAAACAAAGCAGAACAAGACAATCACTTCTAAGGCATCAAAGTCACCTAGCAAAGGAAAGAAAATGGGCGAGGACTTAAATAGGCGGGCTTCTTGTGAAGGGACGAAAATCAAATCAGAATGGGATAAGCAGGATGTTGGCCTGAATTTGGTCGCATTCGATGAAACTACAATGCCTGTCCCGGTCTGCACATGCACTGGAGTAGCACGGCAGTGCTACAAATGGGGTAGCGGTGGATGGCAGTCATCTTGCTGTACCACAACCTTGTCAATGTATCCGCTACCACAGCTTCCTAACAAGCGCCACGCCCGTGTCGGAGGGCGAAAGATGAGTGGAAGTGTCTTTACAAGGCTGCTCAGTAGGTTTGCAGCACAGGGACATGATTTGTCTATACCATTGGATCTCAAGGACTACTGGGCCAGACATGGAACTAATCGCTACATTACCATCAAATAG 1530 0.4791 MNAQKVKENLPLSGNGDRLWEVKSNRMEVLSHPNRVEKLKRSLIGSTKNPMSFNKTRLLVEELGMNGERWCAVKQGRSIMITFGSVELMHMALESESMLNIFEDAWSEDTFVQLGSYGVMLLRLMTSQEIGRDMYGFQSFAHLVNEDASEKEGSVGFEAIDGVDAIAENGGLPDRGSLKGMLHCLTPTSASVTKSSACKMGDGHQHGNGRHTMDYYRGAHSPWNMASQHQAKEPNALVLNKKIRSIMAERAMIELDIAISEKNEALAARDEALRQRDEALAQRDNALRERDNALAALQTREKAVNFSLGRRGSKRLLHPANYPDNMSEAAYSTKDVPITDAFPVPFVPSDAIKSHRAKKTKQNKTITSKASKSPSKGKKMGEDLNRRASCEGTKIKSEWDKQDVGLNLVAFDETTMPVPVCTCTGVARQCYKWGSGGWQSSCCTTTLSMYPLPQLPNKRHARVGGRKMSGSVFTRLLSRFAAQGHDLSIPLDLKDYWARHGTNRYITIK* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2442 509 SMART GAGA_bind_2 200 509 IPR010409 -
Aev08g2442 509 PANTHER - 200 509 IPR010409 -
Aev08g2442 509 PANTHER PROTEIN BASIC PENTACYSTEINE4 200 509 - -
Aev08g2442 509 MobiDBLite consensus disorder prediction 354 383 - -
Aev08g2442 509 Pfam GAGA binding protein-like family 220 509 IPR010409 -
Aev08g2442 509 Coils Coil 262 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2442 Aev-Chr8 23320141 23328073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2442 200 509 BBR or BPC Transcription factor family AT2G21240 57.643 1.90e-120 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Aev08g2442 GAGA_bind 1.3e-95 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2442 - - gmx:100785547 488.034