Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2439 ATGGGTTGCGTGCTTGGTAAGCCGTCCGGTCACGGAGCTCAGCCCCGAAGCCGGAGCGAACAGCAAAGCGCTGCTCCCGACGGAGGTGAGAATGCCGTTACTAGGGTTCGACAGAAGCAGAGGAACCGAAACGCCGGCGATGTTCCGGTAAGTATTCCGGCGCCGGAGCGCCGGAAACCGAGGCTCGATCCGTGCGCTCTAACCCAGCAGGGATGGCCATCGTGGCTTATGGCCGTCGCTGGTGAGGCCATCGGAGATTGGACCCCTCGCCGCGCCAACACTTTTGAGAAGCTCGCTAAGATTGGGCAGGGGACTTATAGCAATGTGTATAAGGCTAGGGACCTTGTGACTGGGAAGATTGTGGCTTTGAAGAAAGTTAGGTTTGATAATTTGGAGCCAGAGAGTGTGAAGTTCATGGCAAGGGAGATTCTTGTGTTGAGAAAACTTGATCACCCTAATGTTCTGAAGCTTGAAGGGTTGGTTACTTCCAGAATGTCTTGCAGCCTTTACTTGGTTTTCGAGTACATGGAACATGATCTTGCAGGTCTTGCTGCCGGTCAAGGTGTTAAGTTCACTGAATCTCAGGTCAAATGCTTTATGAAGCAATTACTCTCTGGCCTTGAGCATTGCCACAGTCAAGGTGTACTGCACCGTGATATAAAGGGTTCCAATCTGCTTATTAATAATGAAGGAATCCTAAAAATTGCAGATTTTGGACTGGCGACTTTCTTTGACCCTAAGAAAAAGCAGTCTATGACAAGCAGGGTTGTGACTCTTTGGTATCGTCCCCCTGAGCTTCTTCTAGGGGCTACATTTTATGGTGTTGGTGTTGACCTTTGGAGTGCTGGTTGCATCTTGGCAGAGCTGCTTGCTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAACAACTGCACAAAATATTCAAGTTGTGTGGCTCTCCGTCTGAGGAATACTGGAAGAAATATAAATTGCCAAATGCTACAATTTTTAAGCCACAACATCCATATAAACGATGCATCTCAGAAACTTTTAAGGATTTTCCTCCATCTTCACTACCTCTTATTGAAACTCTTCTTGCAATAGATCCTGACAAACGTGGCACTGCCTCAGCTGCTCTAAATAGTGAATTCTTTAACACTGAGCCCTACGCTTGTGAACCATCAAGTATACCAAAGTATCCTCCCAGCAAAGAACTGGATGTAAAACTGAGAGATGAAGAAGCAAGAAGGCAAAAAGCTCTTAGTGGAAAGGCTAATGATGGCGCCAAAAGAGTCAGAGCCCGTGAGCGTGGTCGGGCAATTCCAGCCCCTGAAGCCAACGCCGAGATCCAAACAAACTTAGACAGGTGGCGAGTGGTGACCCATACAAATGCAAAAAGCAAGAGTGAGAAATTTCCACCTCCTCATCAAGATGGAGCAGTTGGATATCCACATGATGCAGCACAGAAAGGACCTGTTTCATTTGGTGCCACAGACACCAATTCCTTTGGCTCAGGGATATTTGATGCCAAACCATCTGAAACTGTTGCTGCTGCTGCTGCTGCTGGAGGACCACACAGAGGGAAGAAAACCAGAAAAGAAGACTCTCAAACCACCTCATCATGGAAATTTATGCGTACATTCAAACCTTCAACAGTTGGCCTTTCAATGGATTTATTATTTAGGAGCAAATAA 1677 0.4723 MGCVLGKPSGHGAQPRSRSEQQSAAPDGGENAVTRVRQKQRNRNAGDVPVSIPAPERRKPRLDPCALTQQGWPSWLMAVAGEAIGDWTPRRANTFEKLAKIGQGTYSNVYKARDLVTGKIVALKKVRFDNLEPESVKFMAREILVLRKLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLAAGQGVKFTESQVKCFMKQLLSGLEHCHSQGVLHRDIKGSNLLINNEGILKIADFGLATFFDPKKKQSMTSRVVTLWYRPPELLLGATFYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYKLPNATIFKPQHPYKRCISETFKDFPPSSLPLIETLLAIDPDKRGTASAALNSEFFNTEPYACEPSSIPKYPPSKELDVKLRDEEARRQKALSGKANDGAKRVRARERGRAIPAPEANAEIQTNLDRWRVVTHTNAKSKSEKFPPPHQDGAVGYPHDAAQKGPVSFGATDTNSFGSGIFDAKPSETVAAAAAAGGPHRGKKTRKEDSQTTSSWKFMRTFKPSTVGLSMDLLFRSK* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2439 558 ProSiteProfiles Protein kinase domain profile. 95 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2439 558 Gene3D Transferase(Phosphotransferase) domain 1 178 418 - -
Aev08g2439 558 PANTHER CELL DIVISION PROTEIN KINASE 68 540 - -
Aev08g2439 558 CDD STKc_CDK9_like 95 379 - -
Aev08g2439 558 Pfam Protein kinase domain 95 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2439 558 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 68 540 - -
Aev08g2439 558 MobiDBLite consensus disorder prediction 14 28 - -
Aev08g2439 558 MobiDBLite consensus disorder prediction 458 491 - -
Aev08g2439 558 Gene3D Phosphorylase Kinase; domain 1 82 177 - -
Aev08g2439 558 SUPERFAMILY Protein kinase-like (PK-like) 89 384 IPR011009 -
Aev08g2439 558 SMART serkin_6 95 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2439 558 MobiDBLite consensus disorder prediction 410 430 - -
Aev08g2439 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Aev08g2439 558 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Aev08g2439 558 MobiDBLite consensus disorder prediction 510 535 - -
Aev08g2439 558 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2439 Aev-Chr8 23299290 23303009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2439 87 413 Core Cell Cycle Gene Families AT5G10270 50.729 1.01e-114 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Aev08g2439 Pkinase 3.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2439 K08819 - gmx:100807756 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2439 08 23299290 23303009 Aev08g2439 08 23299290 23303009 ECH