Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2402 ATGGATTGTAATAAAGATGAAGCCTTGAAAGCTAAAGAGTTCGCAGAGAAGAAGCTTCTAGAGAGGGATTTCACTGCCGCAAAAATACTTGCAACGAAGGCTCGAGACCTGGATCCCTCACTTTATGGCATTACACAGCTTCTGGGTACTATTGAGGTATATGTCTCTGCTGAGCAAAAGGTTAACGGTGAAGTTAATTGGTACAGGGTCCTTGGTGTGGAACCCACTGCTGATTATCAAACAATTCGAAAATTTTATCGGAAACTGGTTCTTGACCTGCATCCAGATAAAAATAAGTCGGTAGGTGCGGATGAGGCATTTTATTTTATCACACAGGCATGGACTTATTTATCTGATGAAGCCAAGAAAACTGCATATGACCAGAGATGCAATTTTGTTGCACATCAAGCAACTCCAGGCGGGACACCTTCTGCTTCAGCTTCTCATAATGGTTTCTCTGGCAACTTATCTACTGCTTATTGGAGGGGTAGAGATCAAAGGAGTGCTACTCATCCCAGTCATACTGCAGTACCTCCTCAGTCAATGGACGGGACGTTTTGGACCATGTGCAGATCCTGCAGGACAAAATTTGAGTATAGTGTTTGCTATGCTTATCGCACTCTTATCTGTGTCAGCTGCAATCAGTCCTTTCTGGCTTTTAAGGGATCACCACCGCCTATATACAGAAATGCTTCATCAGCTTCGAGCAGTACTCTGATGATTCATAATAACATTAACTCTACCAGAATGGAAGCAAACAATCCTGTGCCAGGAAGGACACCAATGTCTGCAGTCAACCCATCATTTCGGTCAGTTCCTTCCTTAATCCCTCGCGGTCGCGGTCCTTACAATGTAACAACATCATATTCTACTGCTGCTGAAGCTCCAGGTAATGTTCGGATATCTCCCAACACTATCAAGAGACCTCGTGAAGAATCAACTCCTCCTGTTTCAGCACCTCAAGCCTCTCATTTTGGTTCAAACTCTGTACTGAGAGAAGATAAGTCAAGGAAAAAAAGCTGCACTGAAGAAAGAAGATCTATACGAACTGAAGCTACGCCCCAAAATGAAGGCAAGAGTGTAGCTAACGGATTTGGTGCTCACAAAGATAGTTCAGATACAGGAAGGACTAATGCCTCAGGAACAGTAGACGTTTTGGTTTAA 1164 0.4347 MDCNKDEALKAKEFAEKKLLERDFTAAKILATKARDLDPSLYGITQLLGTIEVYVSAEQKVNGEVNWYRVLGVEPTADYQTIRKFYRKLVLDLHPDKNKSVGADEAFYFITQAWTYLSDEAKKTAYDQRCNFVAHQATPGGTPSASASHNGFSGNLSTAYWRGRDQRSATHPSHTAVPPQSMDGTFWTMCRSCRTKFEYSVCYAYRTLICVSCNQSFLAFKGSPPPIYRNASSASSSTLMIHNNINSTRMEANNPVPGRTPMSAVNPSFRSVPSLIPRGRGPYNVTTSYSTAAEAPGNVRISPNTIKRPREESTPPVSAPQASHFGSNSVLREDKSRKKSCTEERRSIRTEATPQNEGKSVANGFGAHKDSSDTGRTNASGTVDVLV* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2402 387 MobiDBLite consensus disorder prediction 252 270 - -
Aev08g2402 387 Pfam DnaJ domain 66 127 IPR001623 -
Aev08g2402 387 MobiDBLite consensus disorder prediction 294 387 - -
Aev08g2402 387 SMART dnaj_3 65 122 IPR001623 -
Aev08g2402 387 Gene3D DnaJ domain 64 171 IPR036869 -
Aev08g2402 387 CDD DnaJ 66 119 IPR001623 -
Aev08g2402 387 MobiDBLite consensus disorder prediction 252 273 - -
Aev08g2402 387 MobiDBLite consensus disorder prediction 330 352 - -
Aev08g2402 387 PRINTS DnaJ domain signature 68 86 IPR001623 -
Aev08g2402 387 PRINTS DnaJ domain signature 86 101 IPR001623 -
Aev08g2402 387 PRINTS DnaJ domain signature 122 141 IPR001623 -
Aev08g2402 387 PRINTS DnaJ domain signature 102 122 IPR001623 -
Aev08g2402 387 PANTHER HEAT SHOCK PROTEIN-LIKE 1 380 - -
Aev08g2402 387 SUPERFAMILY Chaperone J-domain 56 131 IPR036869 -
Aev08g2402 387 MobiDBLite consensus disorder prediction 308 329 - -
Aev08g2402 387 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Aev08g2402 387 PANTHER BNAC03G44070D PROTEIN 1 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2402 Aev-Chr8 23056206 23057369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2402 4 219 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.180 5.10e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2402 - - ahf:112772645 369.007