Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2401 ATGGACAACAACAACAGCAACCCTCAGCACCAAGCCCAACCAGGCCCATACCCAGGCCCACCAGGAGGCCCACCACCACCACCCTCCGCCGCCCCATTCCACCACCTCCTCCAGCAGCAGCAGCAGCAGCTCCAGATGTTCTGGTCCTACCAGCGCCAAGAGATCGAGCACGTCAATGACTTCAAGAACCACCAGCTCCCCTTAGCCCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTTCGCATGATCTCCGCCGAGGCCCCAATCCTCTTCGCTAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACTATCCGCTCCTGGCTCCACGCCGAGGAGAACAAGAGGAGGACGCTTCAGAAGAACGACATCGCCGCCGCCATAACCCGCACTGACATCTTCGACTTCCTCGTTGATATTGTGCCTCGGGATGATATCAAGGACGATGCTGCTGCCTTGGGCGGAATTGTGGCTGCTGCCGCTGCCGCCACTGCCAGTGGGGTGCCCTATTACTATCCCCCCATGGGCCAGCCCGCCGGCCCGCCTGGTGGGATGATGATCGGAAGGCCCGCGGTGGACCCGGCGACCGGGGTCTATGTGCAGCCGCCTTCGCAGGCTTGGCAGTCTGTGTGGCAGGCTGCTGCTGATGATGGGAGCTATGGGAGTGGTGGCAGTGCTGGACAGGGGAATCTCGATGGACAGAGGGTAATGTCCTCTGAGTTGGGTGAAGATGAAAATCGGTGTAGAGTTAGGGATGTTGTTTGTCTTTTGTGA 774 0.5982 MDNNNSNPQHQAQPGPYPGPPGGPPPPPSAAPFHHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDDIKDDAAALGGIVAAAAAATASGVPYYYPPMGQPAGPPGGMMIGRPAVDPATGVYVQPPSQAWQSVWQAAADDGSYGSGGSAGQGNLDGQRVMSSELGEDENRCRVRDVVCLL* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2401 257 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 234 - -
Aev08g2401 257 MobiDBLite consensus disorder prediction 13 32 - -
Aev08g2401 257 SUPERFAMILY Histone-fold 25 137 IPR009072 GO:0046982
Aev08g2401 257 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 1 234 - -
Aev08g2401 257 MobiDBLite consensus disorder prediction 1 32 - -
Aev08g2401 257 Gene3D Histone, subunit A 32 143 IPR009072 GO:0046982
Aev08g2401 257 Pfam Core histone H2A/H2B/H3/H4 52 128 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2401 Aev-Chr8 23049638 23050742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2401 31 234 CCAAT-HAP5 Transcription Factor Family AT3G48590 86.957 1.24e-108 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Aev08g2401 Histone 2.4e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2401 - - pop:7454724 291.197