Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2389 ATGGCAGTCACATTGTATAACCCTAACTCTGAAGCTGGCTTGAAGAAGCTCAATGAGTATCTTCTTCCCCGTAGTTACATCACTGGGTACCAAGCATCAAAAGATGATGTTACTGTGTATGGAGCGTTCTCTAAGCCTCCATCTGATGAGTATGTGAATGTGTCAAGGTGGTACAAGCACATTGACGCTTTGCTGAGGATTTCAGGTGTTACTGGTGAGGGATCTGGTGTCACTGTGGAATCTTCTCTTGTTGCTGACGATGATATCGCCACTCCTCCACCTGCTGACACTAAGGCTGCTGCTGCCGATGATGATGACGATGATGATGTGGATCTCTTTGGTGAAGAGACTGAGGAAGAGAAGAAGGCTGCTGAGGAGCGCGCTGCTGCTGTGAAGGCTGCCGGAAAGAAGAAAGAGTCTGGGAAATCATCTGTTCTGTTGGATGTGAAGCCATGGGACGATGAAACTGACATGAAGAAGCTCGAAGAAGCCGTGAGGGGTGTTCAGATGGATGGATTGCTTTGGGGTGCATCCAAACTTGTTCCTGTTGGGTATGGTATCAAGAAGTTGCAAATTATGCTTACTATTGTGGATGACCTTGTCTCTGTCGACACTCTCATTGAGGAACATCTTACTGTTGAGCCCATCAATGAATTTCAGCAGAAGCAATTTGCAAGAATGAATAACCAAGGAAGGAATTTTCCACCACCAAAGCAACCACACCAATCCAATCCTCATCAGATTCCAGAGGCTTTAGCATTATTACTTGCTCAACAATCTCAGTATGTACAAGCTCATCATGGCCAATCTCAACAAATCATACAAGCTCAAGCACAATCCATTGCTCAATTGCACAATGCCAATGTTATAGCTAATGCCATTTCTAGTGCTAATGCTAATGCTAATCCCAATATTGCTAATCCTAATGCTATTGCAATTGCCAATGCTAATGCTAATGTTAATGCTGATATTGCTATTGCCATGGCTAATGCTAATGCTAATGCTAGTGCTAATGCTGATGCTAGTGCTAGTGTTGTTCCATCTTCTTCAACTGCTAGAAAATCGAAGAAAAGCGCGGCGAAAAAGTCAACTTCACAGAAGAAGAAAAAGGACTCAAACATACCAGAGAAGGAACAAGTGCAAGAAAAGTTGGTTGAACTTCTTCCTAATTCTGTTTTCTACACTAAGCTTCTTGATCATGAGGCTGAGATTGATGCTGCAATTGCAAAGAAGAAGATTGAGGTGCAAGAGTGTCTTAGAAACCATGCCAATGTTCAGAAGATTCTTCGAGTTTATGTGTTCAACACCTTCGCGAATCAAGCGAAGCCGGGTTTCTTGCGTGACAAGAAAAGTGATGATGTTGTTGAGGAAGAACCTTCTTGGTCGCTTAAGATAACAGGGAGGATAGTGGAGGAAAATGGTGATGATGAGGGTCAAATTAAAAACCCAAAATTCTCTAATTTCTTCAAGAGGATCTTCATATATTTGGATAAGAATCTTTATCCTGATGATCATGTGATTGTGTGGGATAGTGATATTCAGTTACCCCAAATGATGGTTTTGAGGCTATTTGGTGAACAAGAGAAGATACTGAAATTTGAAGATGCTATTGAGAAGTTATCAGATCATTTGACAAGGCCGAAACCGATAGAATTCGAGCATAGGATCAAGCTTTCAGGTGATTGTTTGGAAGGGATTTCATGCTATGATATTCAAGTTGATGTCCCTTTCGCGCTCGAAAAGGACATGGAAACATCCATGGATCTGAAAGACAATTGGGTTACCAAAGGGATTGAAGCTTATGGTAAGAAGATTCATGCCTCATTTGAGGAGATGAATGAGCATAGAAGAACAAGGGCTTTGTTTCTTAGCTTTAGCCAGGATCCTGAAGGGTTTGTTAAGGCTTTCATTGATTCTCAAAGCAAAGGGATGAATCATAACAACAATAACAATGATGGTGATGCTTCTGGAAGTGGAAATCATAGAGCTGGAAAGGAAATTCTTTCTGATGAAATCTTCAATCAACCATGGGTTAAGGATGCTGTGATTCGGTACCTGAACAAAAAAGCTGCAAGTGATGATGCAAATGTTGATCGGAATCGCAGGAATGCTGCTCGTGGAAAAGCTCCTATGAAATAA 2139 0.4161 MAVTLYNPNSEAGLKKLNEYLLPRSYITGYQASKDDVTVYGAFSKPPSDEYVNVSRWYKHIDALLRISGVTGEGSGVTVESSLVADDDIATPPPADTKAAAADDDDDDDVDLFGEETEEEKKAAEERAAAVKAAGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRGVQMDGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLTVEPINEFQQKQFARMNNQGRNFPPPKQPHQSNPHQIPEALALLLAQQSQYVQAHHGQSQQIIQAQAQSIAQLHNANVIANAISSANANANPNIANPNAIAIANANANVNADIAIAMANANANASANADASASVVPSSSTARKSKKSAAKKSTSQKKKKDSNIPEKEQVQEKLVELLPNSVFYTKLLDHEAEIDAAIAKKKIEVQECLRNHANVQKILRVYVFNTFANQAKPGFLRDKKSDDVVEEEPSWSLKITGRIVEENGDDEGQIKNPKFSNFFKRIFIYLDKNLYPDDHVIVWDSDIQLPQMMVLRLFGEQEKILKFEDAIEKLSDHLTRPKPIEFEHRIKLSGDCLEGISCYDIQVDVPFALEKDMETSMDLKDNWVTKGIEAYGKKIHASFEEMNEHRRTRALFLSFSQDPEGFVKAFIDSQSKGMNHNNNNNDGDASGSGNHRAGKEILSDEIFNQPWVKDAVIRYLNKKAASDDANVDRNRRNAARGKAPMK* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2389 712 Gene3D - 135 229 IPR014717 -
Aev08g2389 712 MobiDBLite consensus disorder prediction 691 712 - -
Aev08g2389 712 Coils Coil 114 134 - -
Aev08g2389 712 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 222 - -
Aev08g2389 712 SUPERFAMILY eEF-1beta-like 139 220 IPR036219 -
Aev08g2389 712 MobiDBLite consensus disorder prediction 83 111 - -
Aev08g2389 712 MobiDBLite consensus disorder prediction 343 377 - -
Aev08g2389 712 CDD EF1B 140 209 IPR014038 GO:0003746|GO:0006414
Aev08g2389 712 SUPERFAMILY GST C-terminal domain-like 9 68 IPR036282 -
Aev08g2389 712 Pfam EF-1 guanine nucleotide exchange domain 144 215 IPR014038 GO:0003746|GO:0006414
Aev08g2389 712 PANTHER RIPENING REGULATED PROTEIN DDTFR10-LIKE 1 222 - -
Aev08g2389 712 MobiDBLite consensus disorder prediction 643 662 - -
Aev08g2389 712 Gene3D - 2 78 - -
Aev08g2389 712 MobiDBLite consensus disorder prediction 643 657 - -
Aev08g2389 712 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 106 114 IPR001326 GO:0003746|GO:0005853|GO:0006414
Aev08g2389 712 MobiDBLite consensus disorder prediction 691 705 - -
Aev08g2389 712 SMART EF1_GNE_2 142 227 IPR014038 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2389 Aev-Chr8 22938385 22945053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2389 7 221 Eukaryotic Initiation Factors Gene Family AT2G18110 77.315 1.75e-97 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2389 K03232 - gmx:100777627 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1901 01 24010695 24012684 Aev08g2389 08 22938385 22945053 PCT