Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2387 ATGGTGTCGACGAGACGCAACAGTGGATCTCTCTCTGCAAACAACACCAAACGATCTTCGTCCTCCGAAGACAAAGACAAACCTCCTTCTTCTCCTTCACCTAAGCGCCACAAGGGTGACGGTGGTGGTGGTGGTGGCACGTCGGAGAAACCGGCGCCGCCGGCACCAGCGGAGAATTCGAAGGAATTGCGAGCTCCAGAGGTAGCTGCCGATCCCGGAGAATGCGGCACTGGTGATGCTAAGATCGCCGGCAACGACGGAAAGGCCGATTCCGAGCCGGCCGTGCCTGTGACGGGGCCGATCGCTGATGGTTCTTCGCCGAGCTTGGCAGCTAATAAACCAAGGGGTTCTTTCACTTCGTGGAGTATATATCAGAAGCAAAATCCGAACTTTGAGGGTTCAGTTCCCTGGTGCAAGCTCTTGTCCCAATTTTCACAGAATCCAAATGTTTTGATTTGCCCAGCGAATTTCACGATTGGTTCTAGCAGGCATTCCAACTTCCCATTGAAGGATCAGGCTATAAGTGGAACTTTGTGCAAGATCAAGCATACCCAGTGCGAGGGGAATGCTGTAGCTGTGCTAGAAAGTACGGGCAGCAAAGGATCCGTGCTAGTGAATGGGACGCTTGTCAAGAAGAATACCAGCTGTGTGCTCAACTCTGGCGATGAGGTGGTTTTTGGTTTGATGGGAAATCATGCTTACATTTTTCAGCAACTTAATACTGAAGCTGCAGTTAAGGGTGCAGAAGTTCATAGTGGTGCTGGGAAGTTCCTGCCTGTTGAGAGGAGAGCTGGAGACCCTTCAGCTGTAGCTGGGGCTTCTATTTTGGCTTCTCTGTCTAGCCTCAGGCAGGATCTTTCAAGATGGAAGTCTCCATCTCAGTCTGCCAGTAAACCTCACCGGGCCACTGATGTTTCTAGTCATTCTGCGCTGAATGATGGTACAGAAAATGAACTTGATGGCCTGGAAGGAAACTCAGCTCCAAACGAAGGGACTGATAAAGCTGCTGAAGTTGGAGCAAGTGAAAAGAATTCTCCTATGGATTGCGATCCAGATGATGCAGGCACAGAGGCAGGCAATGTGTTGGAAGAAAGAAATGGGACGAGGGATACACAAGCTGCTGCTGCATCATCTTTGGGTTCATCTGTGCGCTGTGCAGTTTTTAAAGATGATGTTCATGCTGCTATACTGGATGCGAAAGATATAGAAGTCTCCTTTGACAGCTTCCCATATTATTTGAGTGAGAACACAAAAAATGTCCTGATTGCAGCTTGCTTTATACACTTGAAGGATAAAGAACATGTAAAGTACTCAACAGATTTTACAACTATAAACCTCGAATTCTGCTATCAGGTCCCGCAGGGTTTATCTTCCAAGGAAGCTGAGCTGCTCAAAGATGGATTTAATGCTGAGAAATCTTGCAGCTGCACAAAACAAAGTTCTACAGTTGCAGACGTGGCTCGGGGTGTGGATCCATCAATTAGTGAAACAGATACACCTAGCTCTTCGAATGCACCTACTCCATATGGCCTTGAGTCTCAAGCTAAGTTGGAAATTGATAGTGTACCATCTACTTCCGGGACAGCTAAAAGTGGCACGTTTAAACTGGGTGACAGGGTAAAATATAGCTTTTCATCTTCTGGTAGCCTGTATCAGACATCTGCGAGGTACAGGGGCCCACCTAATGGAAGTCGGGGGAAGGTTGTATTGCTCTTTGATGATAATCCATTGTCGAAAGTTGGTGTAAGATTTGATAAACCCATACCAGATGGAGTTGATCTTGGAGGTGCGTGTGAGGGAGGTCAAGGATTTTTCTGCAATGCCAGTGATCTTCGCTTGGAAAACACTGGTATTGAAGAACTGGACAAATTACTTATTAATACGTTGTTTGAGAAGTGTGCCTTTCATTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGAAATGGAGATCCAGTTTCCTTTAGAAGTAAGCTTGAAAAGCTTCCAGACAATGTGGTGGTAATAGGTTCACACACTCACACTGACAGTCGAAAAGAGAAGGCACATCCTGGAGGTTTGCTTTTTACAAAGTTTGGCAGCAATCAGACTGCCCTTCTTGACTTGGCTTTCCCAGATAGTTTTGGAAGATTGCATGACAGAGGAAAGGAAGTCCCAAAGCCAAACAAAACTTTGACTAAGCTTTTCCCAAATAAAGTTATAATTCATATGCCTCAGGATGAGGCACTTCTGGCATCTTGGAAGCAGCAACTTGATCGTGATGTTGAAACTCTCAAAATCAAAGGAAATTTGCATCATTTGCGCACGGTTTTGAGCCGCTGTGGGATGGAATGTGAAGGACTTGAGACGGTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCGGAGAAGATAGTTGGTTGGGCTTTAAGTCATCACCTCATGCACAATTCTGAAGCTGATCCTGGTGCAAAGATTGTTTTGTCTTGTGAGAACATCCAGTATGGAATTGGGATCTTACAGGCTATACAGAATGAGTCGAAGAGCCTGAAGAAGTCTCTTAAGGATATTGTGACAGAAAATGAGTTTGAAAAGAGGCTTCTGGGAGATGTTATTCCGCCTAGTGACATTGGTGTTACTTTTGATGACATTGGAGCTCTTGAACATGTTAAGGATACATTGAAGGAATTGCCATGCAAGGGCATCTTATTATTTGGTCCTCCTGGGACAGGCAAGACAATGCTTGCAAAGGCAGTTGCTACTGAGGCGGGTGCAAACTTCATCAATATTTCCATGTCAAGCATCACATCCAAGTGGTTTGGTGAGGGTGAGAAATATGTGAAAGCTGTTTTCTCCTTGGCAAGTAAAATTGCACCCAGTGTTATATTTGTTGATGAGGTCGATAGCATGTTGGGCCGGAGAGAAAATCCCGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAACTGGGATGGTTTACGTACAAAGGATACCGAGCGTGTTCTTGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATACGGAGGCTACCACGGAGATTAATGGTAAGCTTGCCAGATGCACCAAATAGAGCAAAGATCTTAAAAGTGATACTGGCAAAAGAGGACTTGTCTCCTGATGTTGATCTAAATGCAGTTGCAAGTATGACCGATGGATATTCTGGAAGCGATCTCAAGAATTTGTGTGTAACTGCTGCACACCGTCCAATTAAAGAGATATTAGAAAAGGAGAAAAAGGAACAAGCTGCTGCTCTAGCAGAAGGTAGACCTGCTCCAGCATTAAGTGGAAGTGACGATATCCGGCCTCTAAACATGGAAGACTTTAAGCATGCTCATCAACAGGTGTGTGCAAGTGTTTCGTCTGAATCGATTAACATGACTGAGCTCTCACAATGGAATGATCTATACGGCGAAGGTGGATCGAGAGTAAAGAAATCACTGAGCTACTTCATGACTTGCTGCCGAGCCATTCTGCTTGTAAAACGAAAGCATAGGTTTTTTCCGAAAGAAGTGGAGCCCCTTTCAGAATTTTGGCCTGGCTCTGCTGCTTTTAATTTTGTTCCTTATCCCCCCTCTTGGTCCCCCAGCAAAGAAGATGATGCATGTTGA 3636 0.453 MVSTRRNSGSLSANNTKRSSSSEDKDKPPSSPSPKRHKGDGGGGGGTSEKPAPPAPAENSKELRAPEVAADPGECGTGDAKIAGNDGKADSEPAVPVTGPIADGSSPSLAANKPRGSFTSWSIYQKQNPNFEGSVPWCKLLSQFSQNPNVLICPANFTIGSSRHSNFPLKDQAISGTLCKIKHTQCEGNAVAVLESTGSKGSVLVNGTLVKKNTSCVLNSGDEVVFGLMGNHAYIFQQLNTEAAVKGAEVHSGAGKFLPVERRAGDPSAVAGASILASLSSLRQDLSRWKSPSQSASKPHRATDVSSHSALNDGTENELDGLEGNSAPNEGTDKAAEVGASEKNSPMDCDPDDAGTEAGNVLEERNGTRDTQAAAASSLGSSVRCAVFKDDVHAAILDAKDIEVSFDSFPYYLSENTKNVLIAACFIHLKDKEHVKYSTDFTTINLEFCYQVPQGLSSKEAELLKDGFNAEKSCSCTKQSSTVADVARGVDPSISETDTPSSSNAPTPYGLESQAKLEIDSVPSTSGTAKSGTFKLGDRVKYSFSSSGSLYQTSARYRGPPNGSRGKVVLLFDDNPLSKVGVRFDKPIPDGVDLGGACEGGQGFFCNASDLRLENTGIEELDKLLINTLFEKCAFHLFMKDAEKSIVGNGDPVSFRSKLEKLPDNVVVIGSHTHTDSRKEKAHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVIIHMPQDEALLASWKQQLDRDVETLKIKGNLHHLRTVLSRCGMECEGLETVCIKDQTLTNENAEKIVGWALSHHLMHNSEADPGAKIVLSCENIQYGIGILQAIQNESKSLKKSLKDIVTENEFEKRLLGDVIPPSDIGVTFDDIGALEHVKDTLKELPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVSLPDAPNRAKILKVILAKEDLSPDVDLNAVASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKEQAAALAEGRPAPALSGSDDIRPLNMEDFKHAHQQVCASVSSESINMTELSQWNDLYGEGGSRVKKSLSYFMTCCRAILLVKRKHRFFPKEVEPLSEFWPGSAAFNFVPYPPSWSPSKEDDAC* 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2387 1211 MobiDBLite consensus disorder prediction 491 510 - -
Aev08g2387 1211 Gene3D - 1028 1122 - -
Aev08g2387 1211 Coils Coil 834 854 - -
Aev08g2387 1211 MobiDBLite consensus disorder prediction 494 510 - -
Aev08g2387 1211 Pfam AAA+ lid domain 1049 1084 IPR041569 -
Aev08g2387 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 873 1136 IPR027417 -
Aev08g2387 1211 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 466 1160 - -
Aev08g2387 1211 MobiDBLite consensus disorder prediction 1 18 - -
Aev08g2387 1211 SUPERFAMILY SMAD/FHA domain 136 232 IPR008984 GO:0005515
Aev08g2387 1211 CDD AAA 879 1027 - -
Aev08g2387 1211 MobiDBLite consensus disorder prediction 1 110 - -
Aev08g2387 1211 MobiDBLite consensus disorder prediction 288 359 - -
Aev08g2387 1211 Gene3D - 136 245 - -
Aev08g2387 1211 MobiDBLite consensus disorder prediction 19 34 - -
Aev08g2387 1211 Pfam ATPase family associated with various cellular activities (AAA) 896 1025 IPR003959 GO:0005524|GO:0016887
Aev08g2387 1211 ProSitePatterns AAA-protein family signature. 999 1018 IPR003960 GO:0005524|GO:0016887
Aev08g2387 1211 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 466 1160 - -
Aev08g2387 1211 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 80 455 - -
Aev08g2387 1211 Pfam FHA domain 158 227 IPR000253 GO:0005515
Aev08g2387 1211 SMART AAA_5 892 1029 IPR003593 -
Aev08g2387 1211 CDD FHA 157 237 IPR000253 GO:0005515
Aev08g2387 1211 Gene3D - 873 1135 IPR027417 -
Aev08g2387 1211 MobiDBLite consensus disorder prediction 288 314 - -
Aev08g2387 1211 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 80 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2387 Aev-Chr8 22923967 22932401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2387 845 1104 Calmodulin-binding Proteins AT3G56690 38.202 2.93e-38 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2387 - - gmx:100780098 1761.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2387 08 22923967 22932401 Aev08g2387 08 22923967 22932401 ECH
Aev01g1902 01 24018393 24028031 Aev08g2387 08 22923967 22932401 PCT