Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2385 ATGGCTTCTACTAGTTGTGCTTCTTCTCTCTTACTCTGTCCTTACAACCTTCGTTTCCGCCCAAAACCAACAACATCCCTTTCCGTTTCTCGCTCTGTTCGCTCTTCTGCGCTCCCAGGTACTGATGGAACTCAATCACCCCGCAAAAGGACGAGAAGGATAGAAGGTCCTCGAAAAAGCATGGAAGACTCTGTTCAGCGCAAGATGGAGCAATTTTACGAAGGATCTGATGGGCCGCCGCTCCGTGTTCTTCCTATTGGCGGGCTCGGTGAAATTGGGATGAATTGCATGCTTGTCGGGAACCATGACCGCTATATCCTTATTGATGCTGGAGTCATGTTTCCAGACTATGATGAACTTGGAGTCCAAAAGATTATACCGGATACAACATTCATAAAGAAATGGAGCCACAAAATTGAAGCACTTGTTATAACACATGGACATGAAGATCATATTGGTGCATTGCCTTGGGTCATTCCAGCATTGGATTCTAACACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATCAAAAAACGTTTAAAGGAGCATGGTATGTTTTTTCCATCTAGACTCAAGATATTTAGAACTAAGAAGAAGTTTATGGCTGGGCCATTTGAGATTGAACCTATCAGGGTGACCCATTCTATCCCTGATTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGACTGGAAGATTGATGAGACACCATTGGATGGAAAAGTTTTTGATCGTGAGGCTTTAGAGGAACTTTCCAAAGAAGGAGTAACACTGATGATGAGTGATTCAACAAATGTACTATCACCTGGAAGAACAACAAGTGAATCAGTTGTGAAAGATGCATTATTGAGGCATATTTCAGCTTCTAAAGGAAGGGTTATTACAACCCAGTTTGCATCTAATCTGCATCGGCTTGGAAGTGTGAAAGCTGCAGCTGATTTAACTGGCCGAAAGCTGGTATTTGTTGGCATGTCTTTAAGGACATATTTAGATGCAGCATGGAGGGATGGGAAGGCTCCAATTGATCCATCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGATCTCAAGCAGAACCACGTGCTGCCTTGAATCTTGCATCTTATGGAAGTAGTCATGCTTTCAAACTAACTAAGGAAGACGTTGTTTTGTATTCAGCTAAGGTTATTCCTGGTAATGAGTCTCGTGTGATGAAAATGCTAAACCGCATATCAGAGATTGGATCAACAATAGTGATGGGTAAAAATGAAGGTCTGCACACATCTGGCCATGCGTATCGCGGAGAACTGGAAGAAGTATTAAGAATAGTGAAGCCACAACATTTTCTTCCAATACATGGAGAACTCTTGTTCCTGAAGGAGCATGAATTACTTGGAAAGTCAAATGGTGTTCGGCACACTGCTGTTATTAAAAATGGAGAGATGCTTGGTGTTTCACATTTAAGAAATAGAAGAGTCCATTCTAATGGTTTCATTTCCCTTGGAAAAGAGAATTTACAGTTGAAGTATAGTGATGGTGACAGAGCATTTGGTACATCAAGTGAACTCTTCATTGATGAAAGATTGAAAATTGCATTGGATGGCATCATTGTGATTAGCATGGAAGTATGTCGCCCTCAGGCAGACAATTTGGCTGAAAACACCTTAAAAGGGAAGATACGGATTACCACAAGATGCCTATGGCTGGACAAAGGGAAGCTATTGGATGCACTCCATAAAGCTGCTCATGCTGCTCTTTCAAGCTGCCCTGTAAATTGTCCACTTGCTCACATGGAAAGAACTGTGGCCGAGGTGTTGAGGAAGATGGTGAGGAAGTACAGTGGTAAACGGCCTGAAGTTATTGCCATTGCTATAGAAAATCCTGCTGCTGTTCTTGCTGATGAGATAAGCACAAAGTTGTCGGGCAAATCCCATTTGAGTACCGGAATACCGACACTAAGAAAGGTAGTGGATGGACACCGGAAAGAAAGCCAGCCCACCACTATGCAAATAAGAGATGATGGCCTTGATGTTGAAGGACTTCTACCTGAAGATGACACCAGTAGTACCGCTACATCGAGTGGAGCCGTGGGTGATTCATTGGAATCAGAGGATTCAGATGAGTTTTGGAAGCCATTTATTGCATCCTCACATTCTGAGAAGTCAATCGAAGCTAACAATGGTTATGTTTCACGAAAGGGGAACAAGTCCAATCTCAAGAAAGATGATTCTGAAGACACTGGTGAAGCCAACTCGGAAAAGGCGCCTAATTCTGAACCCAAGTCTTCAAAGTCAGTGAAGAGAAATAAATGGAAATCTGAAGAAGTAAAGAAGCTGATTGGCATGCGTGGGGAACTAGATGATAGGTTTCAAATTGTGAAAGGAAGGATGGCTCTCTGGGAAGAGATATCTCAGAACTTGTCGGCTGACGGGATAAGCAGAAGTCCTGGACAGTGTAAATCGCTTTGGACGTCGCTGGTACAAAAATATGAGGAGATCAAGAATGAGAAGGATAGCAAGAGCAGTTGGCAATATCTTGAAGACATGAAAAGGGTAATCCCTGATAGCGAAGCAATGGCAACAAAATGA 2625 0.4263 MASTSCASSLLLCPYNLRFRPKPTTSLSVSRSVRSSALPGTDGTQSPRKRTRRIEGPRKSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIKKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKRLKEHGMFFPSRLKIFRTKKKFMAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTTSESVVKDALLRHISASKGRVITTQFASNLHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWRDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDVVLYSAKVIPGNESRVMKMLNRISEIGSTIVMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSNGVRHTAVIKNGEMLGVSHLRNRRVHSNGFISLGKENLQLKYSDGDRAFGTSSELFIDERLKIALDGIIVISMEVCRPQADNLAENTLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVAEVLRKMVRKYSGKRPEVIAIAIENPAAVLADEISTKLSGKSHLSTGIPTLRKVVDGHRKESQPTTMQIRDDGLDVEGLLPEDDTSSTATSSGAVGDSLESEDSDEFWKPFIASSHSEKSIEANNGYVSRKGNKSNLKKDDSEDTGEANSEKAPNSEPKSSKSVKRNKWKSEEVKKLIGMRGELDDRFQIVKGRMALWEEISQNLSADGISRSPGQCKSLWTSLVQKYEEIKNEKDSKSSWQYLEDMKRVIPDSEAMATK* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2385 874 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 438 468 IPR011108 -
Aev08g2385 874 MobiDBLite consensus disorder prediction 697 712 - -
Aev08g2385 874 Pfam Myb/SANT-like DNA-binding domain 780 863 IPR044822 -
Aev08g2385 874 Gene3D - 282 432 IPR042173 -
Aev08g2385 874 ProSiteProfiles Myb-like domain profile. 775 839 IPR001005 -
Aev08g2385 874 CDD GT1 781 846 - -
Aev08g2385 874 MobiDBLite consensus disorder prediction 670 717 - -
Aev08g2385 874 SUPERFAMILY Metallo-hydrolase/oxidoreductase 81 495 IPR036866 -
Aev08g2385 874 MobiDBLite consensus disorder prediction 737 782 - -
Aev08g2385 874 SMART Lactamase_B_5a 93 293 IPR001279 -
Aev08g2385 874 PANTHER RIBONUCLEASE J 7 874 - -
Aev08g2385 874 Gene3D - 85 497 IPR036866 -
Aev08g2385 874 MobiDBLite consensus disorder prediction 26 65 - -
Aev08g2385 874 Gene3D - 783 844 - -
Aev08g2385 874 MobiDBLite consensus disorder prediction 26 45 - -
Aev08g2385 874 Pfam Beta-lactamase superfamily domain 104 240 IPR001279 -
Aev08g2385 874 MobiDBLite consensus disorder prediction 747 764 - -
Aev08g2385 874 MobiDBLite consensus disorder prediction 46 65 - -
Aev08g2385 874 CDD RNaseJ_MBL-fold 84 495 - -
Aev08g2385 874 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 7 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2385 Aev-Chr8 22907036 22913521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2385 782 865 Trihelix Transcription Factor Family AT2G38250 36.047 2.04e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aev08g2385 Lactamase_B_2 9e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2385 - - gmx:100783850 1420.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1908 01 24062707 24069376 Aev08g2385 08 22907036 22913521 PCT