Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2379 ATGCTCGAGAATTCCAACTCGGAGCCTGAACGAGTCGAGGTGAGTCAATCTGACTCGGCAGCGATTCTCTTCTCCTCCGGCACCACTGGCCGAGTTAAGGGCGTGTTACTCACACACGGTGGCGCTGCTGACGATACCGCTTTTCCATGTGTTTGGATTCTTCATGCTGATAAGGGAATAGCGGCGGGGGACACGATGGTGATGATGGAGAGGTTCGATTTCGAGGGGATGCTTAGGGCGGTGGAGAGGTACGGGGTCGCTGAGGGTTTGGGTTCCGGTGGCGCGCCGCTCGGGAAGAGGTGGCGGGACAGCTTCAGTGCTAAGTTCCCTGGCGTCGACATTGTGGAGGGCTATGGTCTGACTGAAAGTGCAGGAGGTGGTGCAAGAATGATTGGGCAAGACGAGGCTGAGCGCCATGGTTCGGTTGGTCGACTCGCTGAAAATATGGAGGCCAAGATAGTGGACCCTGCATCTGGAGAGTCTTTGCTTCCTGGTCAGAGAGGCGAGCTGTGGTTGCGAGGACCAACAATCATGAAAGGTTATGTAGGAGACGAGGAGGCGACCGCGCAAACATTGGATTCGGAAGGGTGGATGAAGACTGGTGATCTCTGTTATTTTGATTCTGATGGTTTCCTCTACATTGTAGATAGATTGAAGGAATTGATCAAGTACAAAGCATTTCAGGTTCCTCCTGCTGAATTGGAACATATACTTCACTCAAATCCTGAAATTGCTGATGTTGCAGTAGTTCCGTATCCTGATGAAGATGCAGGGCAGATTCCAATGGCATTTGTGGTGAGAAAGCCTGGAAGCAACATCAATGCATCTCAGGTCATGGAGTTTGTGGCAAAGCAGGTTGCTCCTTACAAGAAAATACGGCGTGTTTCTTTTGTTAACTCTATACCAAAATCTCCAGCTGGCAAAATTTTGAGAAGAGAATTAGTTGATCTTGCTCTAAAGAGTGGTTCATCCAAGTTGTAA 981 0.4985 MLENSNSEPERVEVSQSDSAAILFSSGTTGRVKGVLLTHGGAADDTAFPCVWILHADKGIAAGDTMVMMERFDFEGMLRAVERYGVAEGLGSGGAPLGKRWRDSFSAKFPGVDIVEGYGLTESAGGGARMIGQDEAERHGSVGRLAENMEAKIVDPASGESLLPGQRGELWLRGPTIMKGYVGDEEATAQTLDSEGWMKTGDLCYFDSDGFLYIVDRLKELIKYKAFQVPPAELEHILHSNPEIADVAVVPYPDEDAGQIPMAFVVRKPGSNINASQVMEFVAKQVAPYKKIRRVSFVNSIPKSPAGKILRRELVDLALKSGSSKL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2379 326 ProSitePatterns Putative AMP-binding domain signature. 22 33 IPR020845 -
Aev08g2379 326 Pfam AMP-binding enzyme C-terminal domain 233 308 IPR025110 -
Aev08g2379 326 Gene3D - 1 88 IPR042099 -
Aev08g2379 326 Gene3D - 89 219 IPR042099 -
Aev08g2379 326 Gene3D - 220 321 IPR045851 -
Aev08g2379 326 SUPERFAMILY Acetyl-CoA synthetase-like 3 320 - -
Aev08g2379 326 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 13 315 - -
Aev08g2379 326 Pfam AMP-binding enzyme 9 45 IPR000873 -
Aev08g2379 326 Pfam AMP-binding enzyme 87 224 IPR000873 -
Aev08g2379 326 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2379 Aev-Chr8 22860655 22865881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2379 3 326 Monolignol Biosynthesis Gene Families AT5G63380 56.568 3.95e-149 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2379 K01904 - gmx:100777435 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g2379 08 22860655 22865881 Aev08g2379 08 22860655 22865881 ECH