Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2362 ATGGGATCCAAGAAAAAGCATGAATTGCATGTTGACAGTCATCCCAACACCAAACAGATGTCCAATGACACAGTAAATATCTCAGATGATATCTACAAAGGTGAAACGTCAAAAAGGATTAAGCAAGAGCCTGCACTGCTGCCTGATCCAGGAATGACTCGCAGTGGGATCTATTTCAAGGCCAAATTTCGTGCAAAAGGTGAAATGTCTAAAACAATTAAAAAGGAGCTTCATATGGGCGTGACTACCAATGTGCCGAGTTCCAACTATGAGTTGGGAGCAACAGGGTCTGCGAAGGCTATCAAGAAAGATTTGGTTGAGATCTTTGGCATGATCGATCAAGATCAAGATCAAGATTACGATGATGATAATGTGGACATTAAAACATCAGCCTCCATCTCCTGTGTGGTGCCCACAGACAGTGATAATTCTCTTGAATTGCCGACATGCTTGCCTCATTGTGGAAGAATAACTATGGAGAGGATGGTGGTGTTCCTTCGTAATCCAAAGGATCCAAGGAAGAACCTGTGGCCGGTGCTTTACCATGAACGACGAATGTTAAAAATTCTGGCATCAGGATGGTCACATTTTTGCAGGGCGAATAGCATTCGGCCAGCAGATGTGTGTACTTTTGAGCTCGAGGACAAGTCCAAACGCATCTTCACTGTAGATATAGTCCACAATTGA 687 0.4338 MGSKKKHELHVDSHPNTKQMSNDTVNISDDIYKGETSKRIKQEPALLPDPGMTRSGIYFKAKFRAKGEMSKTIKKELHMGVTTNVPSSNYELGATGSAKAIKKDLVEIFGMIDQDQDQDYDDDNVDIKTSASISCVVPTDSDNSLELPTCLPHCGRITMERMVVFLRNPKDPRKNLWPVLYHERRMLKILASGWSHFCRANSIRPADVCTFELEDKSKRIFTVDIVHN* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2362 228 CDD B3_DNA 141 225 IPR003340 GO:0003677
Aev08g2362 228 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS02G0598200-LIKE 127 227 - -
Aev08g2362 228 Pfam B3 DNA binding domain 160 225 IPR003340 GO:0003677
Aev08g2362 228 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 127 227 IPR044837 -
Aev08g2362 228 ProSiteProfiles B3 DNA-binding domain profile. 164 228 IPR003340 GO:0003677
Aev08g2362 228 SUPERFAMILY DNA-binding pseudobarrel domain 138 225 IPR015300 -
Aev08g2362 228 Gene3D - 122 228 IPR015300 -
Aev08g2362 228 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2362 Aev-Chr8 22700043 22701391 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev08g2362 B3 2.8e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2362 - - adu:107478866 153.295