Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2358 ATGGCGGAGCCGCCAAACGGCGACGTATTCCCGTGGCTGAAGTCGCTGCCGGTGGCGCCGGAATACCGACCAACGCTGACGGAGTTCCAAGATCCGATCGCTTACATTTTCAAAATCGAGAAGGAGGCTTCTAAGTACGGAATCTGTAAGATCATTCCACCCTTCCCTCCACCTCCTAAGAAAACCGCAATCGCCAACTTCACCCGCTCACTCGCCGCCCGGCCCCAACAAGGCCCTGATTCCAGGCCCACATTCACCACTCGCCAGCAGCAGATCGGCTTCTGCCCCCGCCGGCCCAGGCCCGTTCAGAGGCCCGTCTGGCAGAGCGGTGAGCACTACACCTTCCAGGAATTTGAAGCTAAAGCCAAGTCATTCGAGAGAAGCTACCTCAAAAAGCACCTTCACCGGAAAGGAGGGGCTACCGGTGCAGCCGGTAGCCTCTCCGCGCTCGAAGCTGAGACTCTCTTCTGGAAAGCCACCGTTGATAAGCCGTTCTCAGTTGAGTATGCTAATGACATGCCGGGCTCGGCTTTCAGCCGGAAATGCAGGGACGACGGCGATGGTGCGGCTGCTCTGGCGGAGTCTGCGTGGAACATGAGGGAGGTTTCGAGGGCGAATTGCTCGTTGTTGAGGTTCATGAAGGAGGAGATTCCAGGGGTTACGTCGCCGATGGTGTATCTTGCTATGTTGTTTAGCTGGTTCGCTTGGCATGTGGAGGACCATGACTTGCATAGCTTGAATTACCTTCATATGGGAGCTGGCAAGACTTGGTATGGCGTGCCAAGGGATGCTGCTGTGGCGTTCGAGGAGGTGGTTAGGGTTCATGGTTATGGTGGAGAGATAAACCCTCTTGTTACTTTTGCTACTCTTGGTGAGAAAACCACAGTGATGTCGCCTGAAGTATTGATTAGCGCAGGTGTTCCATGCTGCAGGTTAGTTCAAAATGCTGGGGAATTTGTTGTAACATTTCCAAGAGCTTATCACTCAGGGTTTAGTCATGGTTTTAATTGTGCAGAGGCAGCTAACATTGCAACTCCTGAATGGTTGAGAGTTGCTAAAGATGCTGCTATTCGGAGGGCTTCAATCAATTACCCTCCTATGGTTTCTCATTTTCAGTTACTATATGACCTTGCCTTAGCTCTTTATTCTAGAATTCCTGAAGGTATCAGTGCTGAACCACGGAGTTCTCGTCTTAAGGATAAGAAGAGGAGTGAAGGGGAAACTGTAATTAAAGAACTATTCGTTCGGGATGTGTTACAGAACAACAATTACTTCATGAACCATGGAGTCAAGCAAGAAAAAGGTTTCTATTCTGTAAAAGACAAGTTGACTTCATTGTATGAAAGGAACAGTATTTATTCATTTGATGTAAATGGTAACATATGTACTTCAAGTTCTAACCCACTGCAAAGTGACACTGAAGGAGAAACTGGTGAGGGGGATGGATCATCAGATCAGAGACTATTTTCATGTGTCACATGTGGAATATTAAGCTTTTCCTGTGTTGCTGTTGTACAGCCTAGAGAACCTGCAGCTAGAAATCTTATGTCAGCTGATTGTAGCTCCTTAAATAACTGGGTTGGTAGTTCAGGACTTTCTGGGTGGTCGGAAAAGAAGACCCCAACTGGTTTATATGATGATATTGTTCAGTCCGCCCGATACCGGCTACAGACTGCAGAAAAAAATTATGAGGCCTTGAATACTGACAGAGAAAAAGGCAATACAGCTCTTTCATTGTTGGCTTCAGCATATGGAAATTCTTCTGATTCTGAGGAAGATCATGATGACCCAGATATTGCAGTTGATGTTCATGAATCAAGACTTGATAGGAGAGATGATTTCAGTCCTCAATCTTTTGACTACTCTTTTGAGCAACAGGATTATGAAACCGGTTCTGGTCTTGCATCAAACAATACGAGGGCAATGCTTAATTCCACCGCTAATCGTTCCCGTGATGTTCATGATGCTGATAAGTTGTTTGTCAAGCCTATCGTTCCCATTGATAACAAAAATGCTCCATTGGCGCCACATTGTGATGAAGACTCATCCAGAATGCATGTCTTATGTCTGGAGCATGCTGTAGAAGCAGAGCAGCGACTTCGCCCAATAGGTGGAGCCAACATATTGCTCCTGTGTCATCCAGAGGCTGATGCAAAGCTTGTTTCAGAAGATCTGGGGATTGATTGCATGTGGAAGAATATTGCATACACACATGCCACCAAAGAGGATGAAGAGAGGATCCAGTTAGCCCTGGATAGTGAGGAAGCTATTCCTGGGAATGGGGACTGGGCTGTGAAGCTAGGAATCAATCTTTTTATAGTGCAAACCTCAGCCGTTCTCCTCTTTATAAACCAAAGGTCTATCAGAGAAGGGCCAACAGGCAGAAAAAGGAAAAGGAAAATTACTGTAAACAGTGGAAGAAGAGCCAGGAAAGGCAGTCCTGTTGAAAAAGATGTGGTTTCGGATAATTCATCTGAAGAAAAACCAAAACAACAGCCAAGGAGGATTCTTAGAAGTAAGCAAGCCAGGCATAATGAGAGGGATGGTGTTGCTTTGGAAGGGGATTATTCTCCTCCCTATCCTCATAGAAAATCTGTAAGCAAGCAAACAAATTGCTCTGGAAGTGATGCAGTTTCTGACGATTTGGTTGATGATGATTATCCTAGGAAACATAAGAGGAACGCAGAGGGAAGAACTAGGAGCAAGCAAGATGAAGACATAAAGAGAGATGCAAATTCAGAGGATTCAGTGGATGTTGGTTCTCCCCAGTTCCGCAGGGAAAGTCCTGTTGGCGAAGACGTATTTTCCGATGAGGATCATTGTCCTAAGCAGCAAAGGAGGATTCAAAAAAGCAGGCAATGCAAACAGCTTTTAGGAAAAGATGTAATGATTTCTGATGACCATCTGGAGCAGCACGTGAAGAAGCAGAAACGGAGGGTTCCTAAAAGCAGGCAAGCCAAATACCGTGCCGGAGAGGATGCTGTATCAGATTGCCAACTGGAGGGCCACATTCGCAAGTATAGAAAGACTCCTAAAGGCAGGCTGGCCAAATGTGTAGAAGGGGAAGATGCAATGTCTGATGACCAATTGGAGGATCACTTTCAGAAACAGCAAAAGAGTTTTCCTAGAAGGCGGCAAAATAAAGGAATCGATAGGGAAGTTAAAGATGCATTGTCTGATGACCAATTGGAGGACCATTCTCAGATGCTGAAAACTAGCCTTTCTAGAAAAGGCGAAACAAAGGCATTGAAAGAGAAATTCATGATGTGA 3270 0.4602 MAEPPNGDVFPWLKSLPVAPEYRPTLTEFQDPIAYIFKIEKEASKYGICKIIPPFPPPPKKTAIANFTRSLAARPQQGPDSRPTFTTRQQQIGFCPRRPRPVQRPVWQSGEHYTFQEFEAKAKSFERSYLKKHLHRKGGATGAAGSLSALEAETLFWKATVDKPFSVEYANDMPGSAFSRKCRDDGDGAAALAESAWNMREVSRANCSLLRFMKEEIPGVTSPMVYLAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFATLGEKTTVMSPEVLISAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCAEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALALYSRIPEGISAEPRSSRLKDKKRSEGETVIKELFVRDVLQNNNYFMNHGVKQEKGFYSVKDKLTSLYERNSIYSFDVNGNICTSSSNPLQSDTEGETGEGDGSSDQRLFSCVTCGILSFSCVAVVQPREPAARNLMSADCSSLNNWVGSSGLSGWSEKKTPTGLYDDIVQSARYRLQTAEKNYEALNTDREKGNTALSLLASAYGNSSDSEEDHDDPDIAVDVHESRLDRRDDFSPQSFDYSFEQQDYETGSGLASNNTRAMLNSTANRSRDVHDADKLFVKPIVPIDNKNAPLAPHCDEDSSRMHVLCLEHAVEAEQRLRPIGGANILLLCHPEADAKLVSEDLGIDCMWKNIAYTHATKEDEERIQLALDSEEAIPGNGDWAVKLGINLFIVQTSAVLLFINQRSIREGPTGRKRKRKITVNSGRRARKGSPVEKDVVSDNSSEEKPKQQPRRILRSKQARHNERDGVALEGDYSPPYPHRKSVSKQTNCSGSDAVSDDLVDDDYPRKHKRNAEGRTRSKQDEDIKRDANSEDSVDVGSPQFRRESPVGEDVFSDEDHCPKQQRRIQKSRQCKQLLGKDVMISDDHLEQHVKKQKRRVPKSRQAKYRAGEDAVSDCQLEGHIRKYRKTPKGRLAKCVEGEDAMSDDQLEDHFQKQQKSFPRRRQNKGIDREVKDALSDDQLEDHSQMLKTSLSRKGETKALKEKFMM* 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2358 1089 PANTHER LYSINE-SPECIFIC DEMETHYLASE 7 903 - -
Aev08g2358 1089 SUPERFAMILY Clavaminate synthase-like 108 377 - -
Aev08g2358 1089 ProSiteProfiles JmjN domain profile. 19 60 IPR003349 -
Aev08g2358 1089 Pfam jmjN domain 20 53 IPR003349 -
Aev08g2358 1089 MobiDBLite consensus disorder prediction 930 946 - -
Aev08g2358 1089 SMART cupin_9 191 360 IPR003347 -
Aev08g2358 1089 MobiDBLite consensus disorder prediction 792 806 - -
Aev08g2358 1089 Coils Coil 549 576 - -
Aev08g2358 1089 MobiDBLite consensus disorder prediction 863 877 - -
Aev08g2358 1089 MobiDBLite consensus disorder prediction 882 915 - -
Aev08g2358 1089 SMART JmjN_1 18 59 IPR003349 -
Aev08g2358 1089 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 7 903 - -
Aev08g2358 1089 MobiDBLite consensus disorder prediction 792 947 - -
Aev08g2358 1089 MobiDBLite consensus disorder prediction 1056 1089 - -
Aev08g2358 1089 Gene3D Cupin 12 364 - -
Aev08g2358 1089 ProSiteProfiles JmjC domain profile. 191 360 IPR003347 -
Aev08g2358 1089 Pfam JmjC domain, hydroxylase 224 342 IPR003347 -
Aev08g2358 1089 MobiDBLite consensus disorder prediction 810 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2358 Aev-Chr8 22647040 22653516 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2358 684 771 C2H2 Transcription Factor Family AT5G04240 32.258 7.33e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aev08g2358 JmjC 2.8e-37 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2358 - - gmx:100775271 1092.8