Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2357 ATGCTTAATTCCACCACTAATTGTTCCCCTTATGTTCATGATGCTGAAAAGTTGTTTGTCAAGCCCATGGTTCCCATTGATAACAAAAATGCTTCAGTGGCGCCACATTGTGACGAAGACTCATCCAGAATGCATGTCTTCTGTCTGGAGCATGCTGTAGAAGCAGAGCAGCGACTTCTCCCAATAGGTGGAGCCAACATATTGCTCCTGTGTCATCCAGATTATCCCAAGATAGAGGCTGATGCAAAGCTTGTTTCAGAAGATCTCGGGATTGATTGCATGTGGAAGAATATTGCATATATGCATGCTACCAAAGAGGATGAGGAGAGGATCCAGTTAGCCCTGGATAGTGAGGAGGCTATTCCTGGGAATGGGGACTGGACTGTGAAGCTGGGAATCAATCTTTTTTATAGTGCAAACCTCAGCCGGTCTCCTCTTTATAGTAAGCAGATGCCTTACAATTCTGTTATATATAATGCATTCGGTTATAGCTCTCCTGCAAGTTCACCCGTAGAACCAAAGGTCTATCAGAGAAGGGCCAACAGGCAGAAAAAGGTAGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGGCCAATCAGGTTCATCCCCTTTTGTCAAAAAGAGATTCTGAAGATGTTGAATATAAGAGAAGCTTACATGGGTTTATATTACCTGATGAGAAAATTGAGAGATCGGAAAGTGTCCCTAATAGCGATTCTAATATCAGAAAGTTGGGTAGGAAAAGGAAAATGAATGTAAACAGTGGAAGAAGAGCCAGGAAAGGCAGTCCTGTTGAAAAAGACGTGGTTTCGGATAATTCAACTGAAGACAAACCAAAACAACAGCCAAGGAGGATTCTTAGAAGTAAGCAAGCCAGGCTCAAGGAGAGGGTGGCGTTGCTTTCGAAGAGGATTATTCTCCTCCCTATCGTCATAGAAAATCTGCAACATAAGAGTAATGGTCATGTCAAGGAAGCTGAATTTATTGACAATGGTGTGGTTTCAGATGATACAATGCACTATGATGCCAATTGGCAGCAGAGGGGAGAACCTAGCAGCAAGCTAGTTGATGACATAAAGAGAGATGCAAATTCAGAGGATTCATTTGATGATGGTTCTCCCCAGTTTGATAGGGAGAGTCCTGTTGGTGAAGATGTATTTTCCGATGAGGATCGTTGTCCTAAGCAGCGAAGGAGGATTCAAAAAAGCAGGCAATGCAAACAGCTTACAGAAAAAGATGCAGTGATATCTGCTGACCACCTGGAGCAGCACGTGCAGAATCAGCAACGAAGGAATCCTAAAAGCAGGCAAGCCAAATACCGTGGCGGAGAGGATGCTGTATCAGATTGCCAATTGGAAGGCCACACTCGCAAGTATAGAAAGACTCCTAAAGGCAGGCTGGCCAAATGTGTAGAAGGGGAAGATGCAATCTCTGTTGACCAATTGGAGGATCACTTTCAGAACAAGCAAAAGAGTTTTCCTAGAAGGCGGCAAAACAAAGGCATGGATAGGGAAGTTAAAGGTGCATTGTCTGATGACCAATTGGAGGATCTTTCTCAGATGCAGCAAACTAGTCTTTCTAGGAAAAGGCGAAACAAAGGCATTGGAAGAGAAATTAAAGATGTAATGTCTGACGACCAATTGGAGGATCGCCTTCAGAAGCAGAGAAGTTTGCCTAGAAGCAGGCAAAACAAATGCATTGATAGAGAACTAATGGATTACTCGGCAGAAAATATTTCTCATCTGCCCCGTAAAACTCCTAGAAGAAGGCAAGCGAAATGTGTGGAGGAAGATGCTGTAAATTCAGATGAAGTAGTGGTAGGGGATGATTCTCCCAAGAGCACAAGAAAATTCTTCGAACATGTAAAACGAGGTGCTCAAACGCTAACGAAAGCAAAAGCTCCTCAGAAAACCAAGCAGCCTCTCCGTTCGAGGAATAAGCAATCTGCTAACTCCAGAGAGTTCAGTTTAAATACGGAAGAGGAGGAAGAAGGGGGACCTAGCACACGACTCAGGAAGAGAGCCCCAAAAGTTGAGTCTGAAGTAAAACCAAAAGAAAAGCCAACCAAAAGGAAAAAGGTGAAGAATGCTACAGCTGCAAAGGTGAAGGATGAGGAAAAAGAATACCAGTGTGACATCGATGGGTGCACCATGAGTTTCGGGACAAAACAGGAACTGTTGAATCACAAGAGAAATATCTGTCCTATAAAAGGGTGTGGGAAGAAGTTTTTCTCACACAAATATCTGGTGCAACACCGGCGAGTTCATGAGGAGGACCGCCCCTTAAGTGCCCTTGGAAGGGTGCCAGATGACTTTCAAGTGGGCATGGGCTCGTACTGA 2340 0.4397 MLNSTTNCSPYVHDAEKLFVKPMVPIDNKNASVAPHCDEDSSRMHVFCLEHAVEAEQRLLPIGGANILLLCHPDYPKIEADAKLVSEDLGIDCMWKNIAYMHATKEDEERIQLALDSEEAIPGNGDWTVKLGINLFYSANLSRSPLYSKQMPYNSVIYNAFGYSSPASSPVEPKVYQRRANRQKKVVAGKWCGKVWMANQVHPLLSKRDSEDVEYKRSLHGFILPDEKIERSESVPNSDSNIRKLGRKRKMNVNSGRRARKGSPVEKDVVSDNSTEDKPKQQPRRILRSKQARLKERVALLSKRIILLPIVIENLQHKSNGHVKEAEFIDNGVVSDDTMHYDANWQQRGEPSSKLVDDIKRDANSEDSFDDGSPQFDRESPVGEDVFSDEDRCPKQRRRIQKSRQCKQLTEKDAVISADHLEQHVQNQQRRNPKSRQAKYRGGEDAVSDCQLEGHTRKYRKTPKGRLAKCVEGEDAISVDQLEDHFQNKQKSFPRRRQNKGMDREVKGALSDDQLEDLSQMQQTSLSRKRRNKGIGREIKDVMSDDQLEDRLQKQRSLPRSRQNKCIDRELMDYSAENISHLPRKTPRRRQAKCVEEDAVNSDEVVVGDDSPKSTRKFFEHVKRGAQTLTKAKAPQKTKQPLRSRNKQSANSREFSLNTEEEEEGGPSTRLRKRAPKVESEVKPKEKPTKRKKVKNATAAKVKDEEKEYQCDIDGCTMSFGTKQELLNHKRNICPIKGCGKKFFSHKYLVQHRRVHEEDRPLSALGRVPDDFQVGMGSY* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2357 779 PANTHER LYSINE-SPECIFIC DEMETHYLASE 34 456 - -
Aev08g2357 779 MobiDBLite consensus disorder prediction 625 699 - -
Aev08g2357 779 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 554 763 - -
Aev08g2357 779 MobiDBLite consensus disorder prediction 515 529 - -
Aev08g2357 779 MobiDBLite consensus disorder prediction 486 512 - -
Aev08g2357 779 MobiDBLite consensus disorder prediction 531 565 - -
Aev08g2357 779 MobiDBLite consensus disorder prediction 363 405 - -
Aev08g2357 779 ProSitePatterns Zinc finger C2H2 type domain signature. 734 756 IPR013087 -
Aev08g2357 779 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 34 456 - -
Aev08g2357 779 Gene3D Classic Zinc Finger 701 767 - -
Aev08g2357 779 MobiDBLite consensus disorder prediction 656 687 - -
Aev08g2357 779 SMART c2h2final6 732 756 IPR013087 -
Aev08g2357 779 SMART c2h2final6 709 731 IPR013087 -
Aev08g2357 779 MobiDBLite consensus disorder prediction 363 397 - -
Aev08g2357 779 SUPERFAMILY beta-beta-alpha zinc fingers 729 761 IPR036236 -
Aev08g2357 779 MobiDBLite consensus disorder prediction 260 284 - -
Aev08g2357 779 MobiDBLite consensus disorder prediction 423 446 - -
Aev08g2357 779 MobiDBLite consensus disorder prediction 486 565 - -
Aev08g2357 779 MobiDBLite consensus disorder prediction 631 655 - -
Aev08g2357 779 MobiDBLite consensus disorder prediction 233 289 - -
Aev08g2357 779 ProSiteProfiles Zinc finger C2H2 type domain profile. 732 761 IPR013087 -
Aev08g2357 779 PANTHER LYSINE-SPECIFIC DEMETHYLASE 554 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2357 Aev-Chr8 22640278 22643126 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2357 556 762 C2H2 Transcription Factor Family AT3G48430 37.131 5.30e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev08g2357 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2357 - - gmx:100775813 842.032