Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2351 ATGGATGTGCCGCGGCATTCGGCGGATGTTCCTATTTCTAGAACTCTTGTAGCACTGAGGAGAGTGAGGTCATTGAGGGATCCATCAACTAATTCTATGACCAAACTCTCCTCTTTGATCGATCATGTTCACTGGGAAAACGGTTCGAGTAATGGGATTTCTCTGCGGTTTTTGGATGCTAATCCTGCATCTAATGGTGCTTTGATGAGATCAAAGGATTTAGGTTTTGTGGGTTCTGCTGATTTTGCATTGAATTGTGGAGTCTCATCATGTCATGAAGGGCAACTCTATGATCAACCCTCTTACTCTGATCCGAGTGAAAGCTGTTGTGGGGATTTGCCTCACAACTTGCTTCCTAGTAACCATTTCAATGATGTAGCAGGTACTAGATCATCTCAATTAGGGAGAATAGATCACTACACTAAGTCAGTGAAGAAATCGCAGCGAAAACCATCTGAACTTGTGGGTGGCATTGTTAGCCATTTAGGCAGTCCTTGCCTTTCTGTTCGCGATGCTTTCTCGCCGCATAGTTCCTCGATGCATATCGATGATTTAGATGATAATGGAAACGGATGTGGAATAAGCTGTTGTTGGTCTAAGTCACCAAGGTTTAGAGAAACAAATCGTTATTGTGAAATAGATGAGACAGAATTACTTCATGGACATAGAAGCATGAGACTTGTTAGTGGTGAAATCAGTCCAAATTTGGAAACTCCTAGAAACTTATCAATGAAATTCAGGCCTAAATTGTTTAGTGATCTGGTTGGACAAAATGTGGTGGTAAGGTCTCTTCTTGGTGCTATCTTCACAGGAAGGATAACATCATTTTATATCTTCCACGGTCCTCGCGGCACCGGCAAGACATCTGCCTCTAGGATATTTGCTGCTGCACTGAATTGCCTCTCCGCCGGCGAGCAAAAGCCGTGCGGTATGTGCAGAGAATGTGTCTTGTTCTTTTCTGGAAGAAGTAAAGATGTTAAAGAAGTGGATTCTATGAAAATGAATTGTTCAGACCAGGTTAAATCCCTCCTTAAGAAAGCATGCTTCCCTCCGGCTTCTTCGCGGTTTAAGGTTTTCATTATTGATGAGTGTCAGCTACTGAATGGGGAGACATGGGCAAGTCTTTTGAATTGCCTAGACAACCTTTCTCAGCATGTTGTTTTTGTGATGATTACACCGGATTTGGATAAGCTTCCTCGGAGTGCGGTTTCCCGGGCTCAGAGGCATCACTTCCCAAAGATTAAAGATGCTGACATTGCTAGCAGATTAGAAAAGATTTGTGCAGAAGAAGGTATAGATGCAGAACAAGCTGCTCTAGACTTTATTGCTGCGAAATCGTGTGGTTCGCTTAGGGACGCGGAAATGATGCTTGATCAGTTGAGTCTACTTGGTAAAAAGATCACAATTTCCTTAGCTTATGAGCTTACTGGGATTGTTTCTGATGATGAACTGCTCGATTTGCTGGATCTGGCTTTGTCGTCCGACACTTCAAACACGGTTATTCGAGCTCGGGAGCTGATGAGATCAAGGATAGATCCGTTGCAACTTATATCACAGCTGGCAAATCTCATTATGGACATCCTTGCAGGGAAATGTGAGGACAATGTTTCTGAATTCAGAAATAGGCTATCAAGCAGATATACATCCGACTTAGATCTTCAGAAACTAAATCAAGCACTGAAAATTCTTTCTGAAACTGAGAAACAGTTGAGAGTTTCAAAGAATCAAACAACATGGTTCACTGTGGCTCTCTTACAGTTAAGCTCAGTAGACTATTCACCTGTGGATGCAAATAATACCAAGTTGTGTTTGAAGGGAGCATGCAATGGAGATGGTGATTGCTGCAGTTCATCATCCACAGAGAAGAGCTTAAAGCATCTTTCTACAACTCAATGTGATAAGAAATCACATACATTAGGAGTACATGATGATCACAAAAGAACTTTGGATTCTGTTTGGTATAAAGCTACAGAGCTGTGTCAATCTAATCAGCTCAGAACTTTTCTTAGGAAGCAAGGAATGTTGTCATCACTTCATGTTGATTGCAATAATTGCCTTGCTGTCGCCGACTTGGAGTTCCACCATCGCCGACACGTATCTAAGGCAGAGAAGTCATGGAAACTGATAGCAAATTCCTTGCAGTTCATTTTAGGTTGCAACATTGAGTTGAGGATCAATTATGTACCTTGTGCATCTGATTCGAAGTGCGCCAGATTGAAGAGGACAACGATCAGTTTCTTCGGCTGCACGCGTAGAATTCAGCAGAGATTCTTTTCGCCTGATGATGAACAAGGAAGCGAAGAATCAGACTATGCATCTGAGAATCCAATGATGATGGACAATAATAAAAATCAAACACCTTCATTTGTTCTTGAAACTGCAATAAAGCCATTTGAAAGTAGTAGCTTGTTGTAA 2415 0.4182 MDVPRHSADVPISRTLVALRRVRSLRDPSTNSMTKLSSLIDHVHWENGSSNGISLRFLDANPASNGALMRSKDLGFVGSADFALNCGVSSCHEGQLYDQPSYSDPSESCCGDLPHNLLPSNHFNDVAGTRSSQLGRIDHYTKSVKKSQRKPSELVGGIVSHLGSPCLSVRDAFSPHSSSMHIDDLDDNGNGCGISCCWSKSPRFRETNRYCEIDETELLHGHRSMRLVSGEISPNLETPRNLSMKFRPKLFSDLVGQNVVVRSLLGAIFTGRITSFYIFHGPRGTGKTSASRIFAAALNCLSAGEQKPCGMCRECVLFFSGRSKDVKEVDSMKMNCSDQVKSLLKKACFPPASSRFKVFIIDECQLLNGETWASLLNCLDNLSQHVVFVMITPDLDKLPRSAVSRAQRHHFPKIKDADIASRLEKICAEEGIDAEQAALDFIAAKSCGSLRDAEMMLDQLSLLGKKITISLAYELTGIVSDDELLDLLDLALSSDTSNTVIRARELMRSRIDPLQLISQLANLIMDILAGKCEDNVSEFRNRLSSRYTSDLDLQKLNQALKILSETEKQLRVSKNQTTWFTVALLQLSSVDYSPVDANNTKLCLKGACNGDGDCCSSSSTEKSLKHLSTTQCDKKSHTLGVHDDHKRTLDSVWYKATELCQSNQLRTFLRKQGMLSSLHVDCNNCLAVADLEFHHRRHVSKAEKSWKLIANSLQFILGCNIELRINYVPCASDSKCARLKRTTISFFGCTRRIQQRFFSPDDEQGSEESDYASENPMMMDNNKNQTPSFVLETAIKPFESSSLL* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2351 804 MobiDBLite consensus disorder prediction 760 786 - -
Aev08g2351 804 Gene3D - 235 412 IPR027417 -
Aev08g2351 804 Coils Coil 553 576 - -
Aev08g2351 804 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 241 587 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Aev08g2351 804 CDD HLD_clamp_pol_III_gamma_tau 414 477 IPR045085 -
Aev08g2351 804 Gene3D - 478 591 - -
Aev08g2351 804 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 129 779 - -
Aev08g2351 804 SUPERFAMILY post-AAA+ oligomerization domain-like 484 586 IPR008921 GO:0003677|GO:0006260
Aev08g2351 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 463 IPR027417 -
Aev08g2351 804 PANTHER DNA POLYMERASE III SUBUNIT GAMMA/TAU 129 779 - -
Aev08g2351 804 Pfam DNA polymerase III, delta subunit 257 414 - -
Aev08g2351 804 CDD AAA 255 409 - -
Aev08g2351 804 Gene3D - 415 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2351 Aev-Chr8 22603827 22607087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2351 232 526 Core DNA Replication Machinery Family AT1G21690 24.080 1.59e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2351 - - gmx:100819111 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1940 01 24260295 24263858 Aev08g2351 08 22603827 22607087 PCT