Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2342 ATGGCACCACAAAAACCACCAATCTCCACTCTCTTCTTCTTCATTTTCATTTTCACCATCACCAACGCCAAACTCGACCTCCACCCCTCAGACCTCAAAGCCCTCATTTCCATCCAAAACGACATGGGTCTTCGAGTCAACGGTCAACCCTCCACCACCCTCCGCCACCACCCATGCAACACGGAGGGCGTGTTCTGCGAGCGGAGGCTCTCCAACAACCACACCTACCACCTCCGAATCACCAGACTCATTCTTAACAACAAACACCTTAACGGCACTCTTTCCCCTTCCATCACCCACCTCTCAGAGCTCAAAGAACTCTCCCTCCATAACAACCACCTCGTTGACCGCCTCCCCCACAACATCCTCCTCCTCAACAAGCTCGAAATCCTCAACCTCCGAAACAACCACTTCTCCGGCCAAGTTCCCTCGCAGCTCTCCTCATTGATTCGCTTACGCCTCCTCGATCTTTCCTCCAATCGCCTCTCCGGGACCCTCGATTTCCTCAAGTATTTCCCAAATCTCGAAACCCTCAACATCGCCGATAATCTCTTCAGCGGTCGCGTCCCTGTTTCCTTGCGCTCTTTCCGCAATCTCAGAAGCTTCAACTTCTCCGGTAACAGATTCCTTGAAGGCTCAACCCCACTCGCTTCTTCTGACTACAACAATCTCCCGAAACGGTTCATCTTCGCTGAGAGTGGTTCGAATAACAATTCTAGCAGGAGGGTTCATAATACTGCTACCTCTTTATCCCCTGCTCCTGCACCTTCATCAAACCCTCACCACCATCACAAGAAGACGAAGAAGAAGATAGCAGGGTGGGTTCTGGGATTCATAGCAGGAGCATTTGCTGGTACAGCTTCGGGTTTCATATTCTCCTTGATGTTCAAGGTTGCTATGGCTATGGTCAAAGGAGGAGGAAAAGGTTCAGGCCCTGATATCTATAGCCCCTTGATCAAAAAAGCAGAGGATTTAGCATTCTTGGAGAAAGATGATGGGTTGGCTGATTTGGTGGTTATTGGTAAAGGTGGTTGTGGTGAGGTTTACAAGGCTGAATTACCTGGTAGCAATGGTAAAATGATTGCTATAAAGAAGGTTGTTCAGCCACCGAAAGACGCGGCGGAGCTAGCAGATGAAGATAGCAAGCTGCTGCATAAGAAGATGAGGCAGATCAAGTCTGAGATTGCTACTGTTGGTCAAATTAGGCACAGGAACTTGTTGCCATTGTTGGCTCATGTTTCTAGGCCTGATTGCCACTACCTTGTGTATGAGTACATGAAGAATGGAAGCTTGCAGGATCTTCTGAACAAGGTTGAGACTGGTGAGAGGGAGTTGGATTGGTTAACAAGGCACAGGATTGCAATTGGGGTTGCTTCTGGGCTAGAGTACCTTCACATGAATCATAGCCCAAAGATCATTCATAGGGATCTGAAGCCAGGGAACATTCTGCTTGATGATGATATGGAAGCAAGAATTGCTGATTTTGGGCTTGCTAAGGCAATGCCTGATGCTAAGACACACATAACAACTTCCAATGTTGCTGGAACTGTAGGGTATATTGCCCCTGAGTATCACCAGATTCTTAAGTTCACTGATAAGTGTGATATTTATAGCTTTGGGGTTTTGCTTGGTGTGCTTGTGATTGGGAAGCTGCCTTCTGATGAGTTCTTTCAGCACACTGATGAGATGAGCCTTGTGAAGTGGATGAGGAAGGTCATGACTTCTGAGAATCCTAAGCAGGCTATTGATGCAAGGCTTCTTGGGAATGGCTATGAGGAGCAGATGCTTCTTGTTCTAAAGATTGCTTGCTTTTGCACCATGGATGATCCTAAGCAAAGGCCTAATAGCAAGGATATTAGGTGTATGTTGACCCAAATCAAGCACTGA 1887 0.4743 MAPQKPPISTLFFFIFIFTITNAKLDLHPSDLKALISIQNDMGLRVNGQPSTTLRHHPCNTEGVFCERRLSNNHTYHLRITRLILNNKHLNGTLSPSITHLSELKELSLHNNHLVDRLPHNILLLNKLEILNLRNNHFSGQVPSQLSSLIRLRLLDLSSNRLSGTLDFLKYFPNLETLNIADNLFSGRVPVSLRSFRNLRSFNFSGNRFLEGSTPLASSDYNNLPKRFIFAESGSNNNSSRRVHNTATSLSPAPAPSSNPHHHHKKTKKKIAGWVLGFIAGAFAGTASGFIFSLMFKVAMAMVKGGGKGSGPDIYSPLIKKAEDLAFLEKDDGLADLVVIGKGGCGEVYKAELPGSNGKMIAIKKVVQPPKDAAELADEDSKLLHKKMRQIKSEIATVGQIRHRNLLPLLAHVSRPDCHYLVYEYMKNGSLQDLLNKVETGERELDWLTRHRIAIGVASGLEYLHMNHSPKIIHRDLKPGNILLDDDMEARIADFGLAKAMPDAKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVLLGVLVIGKLPSDEFFQHTDEMSLVKWMRKVMTSENPKQAIDARLLGNGYEEQMLLVLKIACFCTMDDPKQRPNSKDIRCMLTQIKH* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2342 628 Gene3D Phosphorylase Kinase; domain 1 327 425 - -
Aev08g2342 628 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 9 628 - -
Aev08g2342 628 SUPERFAMILY L domain-like 77 216 - -
Aev08g2342 628 Gene3D Ribonuclease Inhibitor 28 252 IPR032675 -
Aev08g2342 628 MobiDBLite consensus disorder prediction 233 266 - -
Aev08g2342 628 MobiDBLite consensus disorder prediction 233 256 - -
Aev08g2342 628 CDD STKc_IRAK 340 626 - -
Aev08g2342 628 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 628 - -
Aev08g2342 628 ProSiteProfiles Protein kinase domain profile. 334 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2342 628 Pfam Protein kinase domain 337 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2342 628 SUPERFAMILY Protein kinase-like (PK-like) 334 624 IPR011009 -
Aev08g2342 628 Gene3D Transferase(Phosphotransferase) domain 1 426 628 - -
Aev08g2342 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Aev08g2342 628 SMART serkin_6 334 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2342 Aev-Chr8 22537828 22539714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2342 12 628 Receptor kinase-like Gene Family AT2G31880 63.082 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Aev08g2342 Pkinase 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2342 - - gmx:100811980 864.759