Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2328 ATGGAGATGGAGCGCGTCGTTGAATTTCCACATACTTACATGGATCGCCCCCCGAGAAAGAGGGCAAGATTGGGCTGGGACGTACCCGAAGTCCCAAAGGCTCAGGTAGGATTGTTTTGTGGACAAGATGTTGAGAATATTTCAAGCTATGATCCTTCAGAACATACCACTAGTTCTCTGTTTAAGGGAGTTGCTCGAAATGGTTCTCCCCCATGGCGTGATGATGACAAAGATGGGCATTACATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATCCATAGCAAAATGGGTGAAGGAACCTTTGGGCAAGTCCTGGAGTGCTGGGACAGAGAAAGGAAGGAAATGGTTGCCATAAAAATTGTCCGTGGGATAAAGAAATATCGAGAGGCAGCCATGATAGAAATTGAGGTGCTGCAACAGCTTGGTAAACATGATAAAGGTGGCAATCGTTGTGTACAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGTTCATTTCCCATTGATCTTGTCCGCGACATTGGCAGACAACTGTTGGAATGTGTAGCATTTATGCATGACTTACATATGATCCATACTGACCTGAAGCCGGAGAACATTCTTCTAGTTTCACCAGAATATGTTAAAATCCCTGATTACAAGAGTTCATCCAGGTCACCAAGTTCCTTTTTCAAGAGAGTGCCCAAGTCAAGTGCCATAAAGGTTATTGATTTTGGCAGCACTACTTATGAACGTCAAGATCAAACCTACATTGTATCAACACGTCATTACAGGGCACCTGAAGTTATTCTTGGACTTGGATGGAGCTATCCTTGTGATGTATGGAGCGTTGGCTGTATATTGGTTGAGTTGTGCACTGGTGAAGCTTTGTTCCAGACTCATGAAAATTTGGAGCACCTTGCAATGATGGAGAGGGTGCTTGGACCATTGCCACAGCAGATGTTGAAGAGAGCTGATCGACATGCTGAGAAGTATGTCCGAAGGGGTAGATTGGACTGGCCTGAGGGTGCAGCCTCAAGGGAGAGTATCAAGGCTGTAACAAAGCTTCCTCGATTACAGAACCTTATAATGCAGCATGTGGATCATTCAGCTGGAGATTTAATACATCTTTTGCAGGGGCTACTTAGATATGACCCATTTGAAAGGCTTACAGCCAGGGATGCATTGAGGCATTCCTTCTTTAGGGATCACCTTAGAAGATAA 1275 0.4361 MEMERVVEFPHTYMDRPPRKRARLGWDVPEVPKAQVGLFCGQDVENISSYDPSEHTTSSLFKGVARNGSPPWRDDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVRDIGRQLLECVAFMHDLHMIHTDLKPENILLVSPEYVKIPDYKSSSRSPSSFFKRVPKSSAIKVIDFGSTTYERQDQTYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQQMLKRADRHAEKYVRRGRLDWPEGAASRESIKAVTKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPFERLTARDALRHSFFRDHLRR* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2328 424 ProSiteProfiles Protein kinase domain profile. 93 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2328 424 CDD PKc_CLK 80 418 - -
Aev08g2328 424 Gene3D Transferase(Phosphotransferase) domain 1 147 418 - -
Aev08g2328 424 Pfam Protein kinase domain 93 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2328 424 SUPERFAMILY Protein kinase-like (PK-like) 80 421 IPR011009 -
Aev08g2328 424 SMART serkin_6 93 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2328 424 PANTHER KINASE AFC1 1 424 - -
Aev08g2328 424 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 424 - -
Aev08g2328 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Aev08g2328 424 Gene3D Phosphorylase Kinase; domain 1 80 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2328 Aev-Chr8 22438493 22441541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2328 98 420 Core Cell Cycle Gene Families AT1G76540 25.519 1.31e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Aev08g2328 Pkinase 6.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2328 K08287 - gmx:100808961 829.706