Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2308 ATGGCTGATGGTAACGATGATGCTACAACTGACAAGAACAAGAACATTGAGGTATGGAAGATCAAGAACTTGATCAAACTTCTTGAGGCTGCTAGAGGGAACGGGACGAGCATGATTTCTCTCATCATCCCGCCGCGTGATCAGATATCTCGAGTTAGCAAGATGCTTGGTGATGAGCTAGGCACAGCTTCAAACATCAAGAGCAGGGTGAATCGACAATCTGTTATTGGTGCAATCACCTGTGCACAACAGAAGCTTAAGCTTTATAACAGAGTTCCTGCAAATGGCTTGTTTTGTATACCGGCACGAGAAGTGCTTCATAGATTTGGTGTTGATCTCCCAAAGAAACATGGAAGAGGAGGGCAATCGGCTTTGCGATTCGCCCGTAACTATGTCAGGAAGACTGCAGAGCTCGCGAGGCAGTTTTACATTGATCATGCTACCAGCCAACCGAATGTTTCCGGATTGATACTCGCAGGTTCAGCTGATTTCAAGACCGAGCTTAGTCAGTCTGATTTGTTTGATCCTCGACTTAAGGCGAAGATTCTTAAGGTTGTAGATGTGTCCTATGGAGGGGAGAATGGGTTCAATCAAGCTATTCAACTTTCTGCTGAGGTTCTGTCCAATGTGAAATTCATCAATGAGAAGCACTTGATCGGAAAGTTCTTTGAGGGAATCAGAAAAGACAATGGAAAGTCAGTTTATGGGGTTTGTGTTGAAAATAGTGATACTGATGAGGTTGTGATTAGGCACTTCAACAAGGAGCAAGAGGCCAATCAGGACAATTTCTGGGACCCTGCAACAAGTGCTGCTTATGAGGTTCAGGAGAAGATATCTCTACTAGAATGGTTTGCGAATGGATACGACAAACAATTCGGCTGTGCTCTCGAGTTTGTCACCAACAAGTCGCAAGAAGGTTCGCAGTTTTGCAACAGCCATGGTTTTGGTGGGATAGGTGCAATCCTGCGTTTTGAGGTTGAACTCGAAGATTCCGATGAAGATGATGAAGTTGTAAGCGATTATGATCAAGTTGAGAGCAATTCAGAGTAG 1050 0.4438 MADGNDDATTDKNKNIEVWKIKNLIKLLEAARGNGTSMISLIIPPRDQISRVSKMLGDELGTASNIKSRVNRQSVIGAITCAQQKLKLYNRVPANGLFCIPAREVLHRFGVDLPKKHGRGGQSALRFARNYVRKTAELARQFYIDHATSQPNVSGLILAGSADFKTELSQSDLFDPRLKAKILKVVDVSYGGENGFNQAIQLSAEVLSNVKFINEKHLIGKFFEGIRKDNGKSVYGVCVENSDTDEVVIRHFNKEQEANQDNFWDPATSAAYEVQEKISLLEWFANGYDKQFGCALEFVTNKSQEGSQFCNSHGFGGIGAILRFEVELEDSDEDDEVVSDYDQVESNSE* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2308 349 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 11 98 IPR024049 -
Aev08g2308 349 Pfam eRF1 domain 2 102 209 IPR005141 -
Aev08g2308 349 SMART eRF1_1_2 9 137 IPR005140 -
Aev08g2308 349 Gene3D eRF1 domain 2 104 209 IPR042226 -
Aev08g2308 349 Gene3D - 237 344 IPR029064 -
Aev08g2308 349 Pfam eRF1 domain 3 212 326 IPR005142 -
Aev08g2308 349 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 239 343 IPR004403 GO:0003747|GO:0006415
Aev08g2308 349 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 102 237 IPR004403 GO:0003747|GO:0006415
Aev08g2308 349 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 10 98 IPR004403 GO:0003747|GO:0006415
Aev08g2308 349 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 10 98 - -
Aev08g2308 349 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 102 237 - -
Aev08g2308 349 Gene3D eRF1 domain 1 4 103 IPR024049 -
Aev08g2308 349 SUPERFAMILY L30e-like 209 330 IPR029064 -
Aev08g2308 349 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 239 343 - -
Aev08g2308 349 SUPERFAMILY Translational machinery components 102 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2308 Aev-Chr8 22287744 22289069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2308 11 97 Eukaryotic Initiation Factors Gene Family AT1G12920 79.310 1.32e-41 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2308 K03265 - gmx:100775731 329.331