Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2305 ATGTTATCAAGAGTGCAACATAAGAACTTGGTGAAGTTTATCGGTGCCTGCAAGGAGCCTGTAATGGTGATTGTAACCGAGCTCTTATTGGGAGGAACCCTGCGCAGGTATTTGCTGAACATGCGACCCGAATGCTTGGAAAGGCATGTTGCGATTGGCTTTGCACTTGACATTGCACGTGCTATGGAGTGCCTGCATTCTCATGGAATCATCCACCGCGATCTTAAACCAGATAACTTGCTCTTGACTGAAGACCAAAAACTAGTCAAGCTTGCAGACTTTGGCTTAGCTAGAGAAGAGTCATTAACTGAGATGATGACTGCTGAAACAGGAACTTACCGTTGGATGGCACCGGAGTTGTATAGCACTGTCACACTGAGGCAGGGTGAGAAGAAGCATTACAATCATAAAGTCGATGCATATAGCTTTGCGATTGTGCTGTGGGAGCTTTTACACAACAAAGTTCCATTTGAAGGCATGTCAAACCTTCAGGCAGCTTATGCCGCAGCCTTTAAGAATGTAAGGCCAAGTGCAGAGAATCTTCCTGAGGAATTGGCTATAATCCTAACTTCATGCTGGCAAGAGGATCCGAATGCTCGACCCAACTTCACTCAGATAATCCAGATGCTCCTAAATTATCTTTACACCATTTCACCACCTGAACCTGTGATTCCTTCAAGAGTATTCACTTCTGAGAACACTGTCTTGCCACCGGAGTCCCCTGGTACTAGCTCTTTGATGGCGAAGCGCGATGACACGGGGAAACGCCAAGAGCAAAGGATGAAATCAAATCTGATGGTTTTCTTTGCTGCTTCAGTCAGTGTTATTAACACCTGA 837 0.4552 MLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRRYLLNMRPECLERHVAIGFALDIARAMECLHSHGIIHRDLKPDNLLLTEDQKLVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKVPFEGMSNLQAAYAAAFKNVRPSAENLPEELAIILTSCWQEDPNARPNFTQIIQMLLNYLYTISPPEPVIPSRVFTSENTVLPPESPGTSSLMAKRDDTGKRQEQRMKSNLMVFFAASVSVINT* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2305 278 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 251 - -
Aev08g2305 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 70 82 IPR008271 GO:0004672|GO:0006468
Aev08g2305 278 SMART serkin_6 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2305 278 Pfam Protein tyrosine and serine/threonine kinase 1 210 IPR001245 GO:0004672|GO:0006468
Aev08g2305 278 MobiDBLite consensus disorder prediction 235 256 - -
Aev08g2305 278 Gene3D Transferase(Phosphotransferase) domain 1 1 220 - -
Aev08g2305 278 SUPERFAMILY Protein kinase-like (PK-like) 1 238 IPR011009 -
Aev08g2305 278 PRINTS Tyrosine kinase catalytic domain signature 26 39 IPR001245 GO:0004672|GO:0006468
Aev08g2305 278 PRINTS Tyrosine kinase catalytic domain signature 138 160 IPR001245 GO:0004672|GO:0006468
Aev08g2305 278 PRINTS Tyrosine kinase catalytic domain signature 181 203 IPR001245 GO:0004672|GO:0006468
Aev08g2305 278 PRINTS Tyrosine kinase catalytic domain signature 64 82 IPR001245 GO:0004672|GO:0006468
Aev08g2305 278 CDD STKc_MAP3K-like 1 210 - -
Aev08g2305 278 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g2305 278 PANTHER SERINE-THREONINE PROTEIN KINASE 1 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2305 Aev-Chr8 22275851 22277807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2305 1 268 MAP Kinase Kinase Kinase AT5G50180 80.147 2.76e-163 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aev08g2305 PK_Tyr_Ser-Thr 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2305 - - gmx:100796593 496.123