LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev08g2292	ATGTGCTTGCTAGGCACACTGTTCAGTGATCCCTACTACTTCTTTGCCTCTCCCAATTTTCACCGATTCTCTGTTATTAATCGTGTCCCTTCTCTTCTCTCTATCTCTTCCTCCATCAACCGCCATATTCACCACACAATGAAAAATCATCATCATCTCTGTTCCGTTTCCTCGTCCGTACTGTTTCGCCTCGTTGCTACGCTCTGTTTTCTCGTTCTCTCTGCCGTCTCCGACGACGTGGCGGTGATGAACGCTCTCAACAAGACGATTAATCTATCGGGGACGCTGAACTGGTCGGGCCTCGACGTGTGCCAATGGAAGAACGTGCAGTGCAGTTCAGGTTCATCACCAGTCCAAGTCACATCGATCCAACTCGCGAACCTAAACCTCCATGGCACATTACCCAAAGAAATCGTCGAGCTTTCGCAGCTACAACACTTCGATGTCCGGCAGAACAGTCTCTCCGGCGCCGTTCCTTACATGCCGAAATCTCTCCGGGAGCTTTTCGTCAGCAACAACAATTTCACATCGTTTCCCAACGATTTCTTCAACGGCATGGCGAATCTTGAAACCGTTAGCATCGGATACAACAGCTTCCCTTCCTGGAACATTCCACCGAGCCTCAAGAACTGTGTTGCCCTCATCAGTTTCTCCGCTATCAAAGCCAATTTCGTTGGCCCAATTCCCAATTTTGTCAGCAAGGATAATTTTCCTGGTATGAATAGTTTGACCCTGTCTTTCAATAGTCTTGAAGGTGAATTGCCTTCGAGTTTTGCAGGGAGCCCAATTGTGACGCTTTGGTTGAACGGTAACAAATTCAATGGCACGCTTGAAGTGTTGCAGAACATGAATTCTCTTGGACAAATTTGGGTGCATGGGAATTCTTTCACTGGTCCAATACCTGAATTCACGAGCAATGATCAGCTTTATGATGTTAGTTTGAGGGATAACAAATTAACAGGGATTGTTCCTCAGTCTCTTATCGATCTTATTTCGCTTCAGGTTGTGAATTTGACCAATAATTTGCTTCAGGGTCCATTTCCGAAGTTCAAGGATGGTGTGAGGGTCGATAATCAAGGAGTTAATCGGTATTGCACTAAGGTGGCTGGTGAGAAGTGTAGTCCAGTTGTGGAGACTCTGTTGTTTGTTGCTAAGCCTTTGGGTTACCCTGCAAAGCTTGCTGAGAAACATGGGTTTCTCTGGAGTATTTCTCCGGCTTTTGCGAACCTTACTGATTTAACTATGTTGATTCTTTCTGGGAACAATCTCACTGGGACTATACCCCTTGAACTGACAAATTTGCCTGCTCTGAAGGAAGTTGATGTTTCGAATAATAATTTGTATGGTAAGATTCCAAAGTTTGGTGCAAATGTGGTTGTTAAGACTGATGGGAATCCTAGTATTGGAAAGGATGGGCCTCTAGTGGCACCGGGACCGGGGAGTGGAGGTGGTGGCTCTGGAGGGAGGAAAGGGAATGTTGGAGCAATGGCTGGTGTTGTGGTTGGTGTTGTGGTTTTGCTTGGTGCAGGGGGTCTTGTGTTTGTTATGTATGGTAGGAAAAAGAAGCGTAGTGGTGGTGGTAAAGCTCAAAATTCGAATGCAATTGTTCTGCATCCTCGTCATTCTGGAGATGGGGATGCTGTGAAGATAAGTGTTGTGGACTCTACTACTGGTGTTGGTCATGGTCATGATGGGATGGGATCATATAGTCCTGCTGCAAGTAGTGATGTTCAGCATGTGGAAGCTGGTAACATGGTGATTTCAATTCAAGTTTTGAGACAGAGGAGGCTTGTTATTGCCTTGGATGTTGCTAGAGGCGTTGAATATCTTCATGGTTTGGCACAGCACATTTTCATACACAGAGATCTTAAACCATCCAACATCTTGCTTGGGAATGATATGCGCGCTAAAGTATCAGACTTTGGATTGGTTCGGCTTGCTCCGGAAGGACAGACATCGTTCGAGACTAGACTTGCTGGAACTTTTGGTTATCTGGCTCCAGAGTATGCAGTCACTGGACGAGTTACCACAAAGGTTGATATATATAGCTATGGAGTGATTCTTATGGAGATGATAACCGGAAGGAAAGCAATTGATAGCAGTCAACCAGAAGAAAACATCCACCTCGTTACATGGTTCCGGCGGATGCTACTGAACAAAGATTCAATCCGGAAGTTCATTGATCCAGCAATTGATGTTAATGATGATGAGGAAGCCTTAGCCAGTTTTACCACTGTTGCAGAGTTGGCTAGCCATTGCTGCGCGAGGGAGCCGTATCAGCGCCCGGATATGAGTCATGTGGTGAATGTGCTAGCCCCTCTTGTTGAAATCTGGAAACCTGCTGAACCAAATGTTGATGATATATATGGGATTGACTTGGACATGAGCTTGCCTCAAGCACTGAGTAAATGGCAGGCCTTTGAAGGAAGGAGCACTTTGGATTTATCATCTTCATCAATGCTTACTAGTGGAGAAAATACTCAGTCAAGCATACCAACTCGGCCTTCTGGATTTGCAGATTCCTTTACATCTTCTGATGGTCGATGA	2547	0.455	MCLLGTLFSDPYYFFASPNFHRFSVINRVPSLLSISSSINRHIHHTMKNHHHLCSVSSSVLFRLVATLCFLVLSAVSDDVAVMNALNKTINLSGTLNWSGLDVCQWKNVQCSSGSSPVQVTSIQLANLNLHGTLPKEIVELSQLQHFDVRQNSLSGAVPYMPKSLRELFVSNNNFTSFPNDFFNGMANLETVSIGYNSFPSWNIPPSLKNCVALISFSAIKANFVGPIPNFVSKDNFPGMNSLTLSFNSLEGELPSSFAGSPIVTLWLNGNKFNGTLEVLQNMNSLGQIWVHGNSFTGPIPEFTSNDQLYDVSLRDNKLTGIVPQSLIDLISLQVVNLTNNLLQGPFPKFKDGVRVDNQGVNRYCTKVAGEKCSPVVETLLFVAKPLGYPAKLAEKHGFLWSISPAFANLTDLTMLILSGNNLTGTIPLELTNLPALKEVDVSNNNLYGKIPKFGANVVVKTDGNPSIGKDGPLVAPGPGSGGGGSGGRKGNVGAMAGVVVGVVVLLGAGGLVFVMYGRKKKRSGGGKAQNSNAIVLHPRHSGDGDAVKISVVDSTTGVGHGHDGMGSYSPAASSDVQHVEAGNMVISIQVLRQRRLVIALDVARGVEYLHGLAQHIFIHRDLKPSNILLGNDMRAKVSDFGLVRLAPEGQTSFETRLAGTFGYLAPEYAVTGRVTTKVDIYSYGVILMEMITGRKAIDSSQPEENIHLVTWFRRMLLNKDSIRKFIDPAIDVNDDEEALASFTTVAELASHCCAREPYQRPDMSHVVNVLAPLVEIWKPAEPNVDDIYGIDLDMSLPQALSKWQAFEGRSTLDLSSSSMLTSGENTQSSIPTRPSGFADSFTSSDGR*	849

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev08g2292	848	PANTHER	TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED	59	396	-	-
	Aev08g2292	848	SUPERFAMILY	L domain-like	77	349	-	-
	Aev08g2292	848	Pfam	Protein kinase domain	598	769	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev08g2292	848	Gene3D	Transferase(Phosphotransferase) domain 1	588	784	-	-
	Aev08g2292	848	PANTHER	OSJNBA0070M12.3 PROTEIN	59	396	-	-
	Aev08g2292	848	Gene3D	Ribonuclease Inhibitor	369	472	IPR032675	-
	Aev08g2292	848	PANTHER	OSJNBA0070M12.3 PROTEIN	594	848	-	-
	Aev08g2292	848	PANTHER	OSJNBA0070M12.3 PROTEIN	396	594	-	-
	Aev08g2292	848	ProSiteProfiles	Protein kinase domain profile.	501	775	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev08g2292	848	MobiDBLite	consensus disorder prediction	817	848	-	-
	Aev08g2292	848	SUPERFAMILY	Protein kinase-like (PK-like)	595	786	IPR011009	-
	Aev08g2292	848	MobiDBLite	consensus disorder prediction	469	488	-	-
	Aev08g2292	848	SMART	serkin_6	499	775	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev08g2292	848	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	618	630	IPR008271	GO:0004672\|GO:0006468
	Aev08g2292	848	Gene3D	Ribonuclease Inhibitor	76	368	IPR032675	-
	Aev08g2292	848	PANTHER	TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED	594	848	-	-
	Aev08g2292	848	PANTHER	TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED	396	594	-	-
	Aev08g2292	848	SUPERFAMILY	L domain-like	402	453	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev08g2292	Aev-Chr8	22155274	22161247	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev08g2292	64	786	Receptor kinase-like Gene Family	AT5G62230	25.335	5.21e-49	185

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-IX	Aev08g2292		Pkinase	1.9e-28	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev08g2292	-		K00924	gmx:100776064	526.554