Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2286 ATGGCATCATCAAGCTCATACAATTCTCCATGTGCTGCCTGCAAATTCCTGAGGAGAAAATGCATGCCAGGATGCATCTTTGCACCTTACTTCCCACCTGAGGAGCCCCAGAAATTCGCTAACGTCCACAAGATCTTTGGTGCCAGCAACGTGACCAAGCTCCTCAACGAGCTCCTGCCTCATCAGAGGGAGGATGCAGTGAACTCCCTCGCATATGAGGCAGAAGCTCGTGTGAGAGACCCAGTCTACGGTTGCGTAGGCGCCATCTCCTTCCTCCAGAGACAAGTCCAGAGGCTCCAGAAGGAACTTGATGCCGCCAATGCCGATCTTCTTCGCTACGCTTGCAATGAAATCCCTCCTCATTCTCATTCTCATCATCATCATCAATCTCTCCCAGCTATGCCACCAAGCATAGCTTCAATTCAACAAATCCCTCAAAGGCATCACCACTTTGGTGTTGCAACAAGGATTGGTAATGATGTTGGAAGTGGGCTTTATAGACAATCTCCTACTACAACCACTACTACTTTTTCTTTCCCTTATTCTCTTCCTTGGTTTGATCCCTCTCCTGAGGATATCAATGGAGGAGGAGGAGAAGGAGGAGGTGGTTTGTGA 615 0.4878 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYACNEIPPHSHSHHHHQSLPAMPPSIASIQQIPQRHHHFGVATRIGNDVGSGLYRQSPTTTTTTFSFPYSLPWFDPSPEDINGGGGEGGGGL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2286 204 Coils Coil 89 116 - -
Aev08g2286 204 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Aev08g2286 204 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Aev08g2286 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 200 - -
Aev08g2286 204 PANTHER ELONGATED PETIOLULE 1 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2286 Aev-Chr8 22108236 22108850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2286 1 113 AS2 family AT5G63090 94.737 2.79e-74 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev08g2286 LOB 3.6e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2286 - - gmx:100799774 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1984 01 24580232 24580828 Aev08g2286 08 22108236 22108850 PCT