Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2244 ATGATGAAGAAAGGAAGCACAAGTAATGAGTCTCCTAATAAACTTGACCGCAAAATCGTTGAAAGGAACCGCAGAATTCACATGAAATCTCTTTGCTTCAAGCTTGCTTCTCTTGTTCCTTCCAATCACAAATATTTCCAACAATATTCCAAATCCAAGGACATGTTAGCACAACAAGACCAGCTGGATCTGGCAGCAAGATACATAAAGCATATGAGAGAAAGGATAGAGAAATTGATGAAGCAGAAGGAGCAAGCAATGATGGGGTCAAACCAACAAACACATAATAATGATAATAATAATTATAACAATAATAGTAAAATGGTAAATAGTAATTTGGACACCAAATTGCCACTACTTGAGCTAAGAGATTTGGGTTCAAGCATAGAAGTGGTGTTGGTGTGTGAATTGAAGAACAGGTCCTTTATGTTGTACGAAGTAATTAGTATCCTTGAGGAAGAGGGTGCTGAAGTTGTAACCGCAAGTTTCTCAAATGTTGGGGATAAGATATTTTACACTGTTCACGCTCAGGTCAAAATATCAAGAGTGGGTGTAGAGACCACAAGGGTGCATGAGAGGCTTAATGACTTAATTGCCCCTATTGAAATCTCTTAG 615 0.3789 MMKKGSTSNESPNKLDRKIVERNRRIHMKSLCFKLASLVPSNHKYFQQYSKSKDMLAQQDQLDLAARYIKHMRERIEKLMKQKEQAMMGSNQQTHNNDNNNYNNNSKMVNSNLDTKLPLLELRDLGSSIEVVLVCELKNRSFMLYEVISILEEEGAEVVTASFSNVGDKIFYTVHAQVKISRVGVETTRVHERLNDLIAPIEIS* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2244 204 Coils Coil 69 93 - -
Aev08g2244 204 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 7 197 IPR015660 GO:0003700|GO:0006357
Aev08g2244 204 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 90 IPR036638 GO:0046983
Aev08g2244 204 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 72 IPR011598 GO:0046983
Aev08g2244 204 SMART finulus 18 78 IPR011598 GO:0046983
Aev08g2244 204 Pfam Helix-loop-helix DNA-binding domain 17 72 IPR011598 GO:0046983
Aev08g2244 204 Gene3D - 12 112 IPR036638 GO:0046983
Aev08g2244 204 PANTHER OS01G0108400 PROTEIN 7 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2244 Aev-Chr8 21594560 21597027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2244 15 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 34.595 3.89e-23 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev08g2244 HLH 2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2244 - - gmx:100790403 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2026 01 24942110 24943461 Aev08g2244 08 21594560 21597027 PCT