Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2241 ATGTCTTCCAATCCCAATCCCATTCCTCCACCACCGCCCGATCGCCGCCGTCCCCTCTCTTTCCCGGCGGTGCATCCCTCCGACTCCACCTCTCCCTCCACCCTCCTCTCCTCCCTCCTCACCCTCTCCCAAACCATCCTCCACCTCAGCCCCTTCTTCACCAATCGCCGCAACGCGCGTGAGGCCACGCGCCAAGTCTCCCTCCTCCTCCTCTTCCTCCAAGACCTACGCCCCTCCCTCCTCCCAAACGACGCCGTTTCATCCCTCTCCGACCTCCACTTCGCCTTCCAGAACCTTCACTTCCTCCTACACGATTGTGCTCGCCAAGGCCCACGCCTCTTCATGCTCCTCAAATCCCGCCACGTGGCATCCCTTTTCCGGTCCGTATTTCGCGCCGTCGCAACCGCACTCGAGTCGCTCCCGCTTCAGAAAATCGAAGTTTGTTGGGAAGTTAGAGAGTTAGTTGAGTTAGTTACGAAGCAAGCGAGGAAAGCGAGAGGAGTGATATTCGAAACGGTTGATTTCACTTCTCTTAAAAATGCCGAGAGTTCCGAAACGAGGCGCGGCGGTGGCACGGAGGTTTTGAGCTGCGAGAGGCGGCCGCCGGAGGATTTCCGGTGTCCAATCTCGCTGGAGATGATGACGGATCCTCCGGAGTCGCAGCGGAAGCCTGTCGCGAACCGCGAGGCCGGTAGCCCTGCCGCCGCTCACGCAGTGCAGTTCCTCTGCTGGTTTCTCGCTCGGAGGCTCGTGTTTGGAACAGAGGAGCAGCAGAACAAGGCTGCGTATGAGGCTAGATTGCTTGCAAGGTCCAATATCTTCAACAGAACGTGTTTGATTGAGGTTGGAGTGGTTCCTCCATTGCTTGATCTCTTAGCTTCTGGTGATACAATAATGCAAGAAAATGCAATGGCTTCATTGTTGAAGCTCTCAAAACATGGCAATGGCCAGAAATGTATAATGGAGAGTAGAGTTCCTGCGCTTGTTGGAGTCTTGTCTTCTTCCTTGGACAAAGCTGATCTTGCGACCGATTGTCTAGCAGTTCTTGCAGCCTTGGCAGAGAGTTCCGAGGGATCACGTGCCGTGTTACAAGCTGAGGCATTGCATTTGATCGTTATGATCCTGCAATCTGTAACATCTCGCGCTGCCAAGGAACATTGTGTTTCGATTTTGATGTCTGTGTGTGTGCATTTTGGTGCAGAAGTTGTGGGTCATCTGGTTGAAGAACCTTCGCTCATGCCTCTGCTCTATTCGATTCTCACTGATGGTACTCCTCATGCTGCAAAGAAAGCAAGATTGAGGTTTACCTATGGCCACGGAACCAAAGCAGCCACCGAGGACGTCAAGATCGATCTCTTCGAAGACGATGATGAGTTCGAAGAGTTTGAAATCAATGAAGAGTGGGATGACAAAGAGGAAGGGAAAGAAGTGATCCAACAGTGGGAGGATGATTGGGATGATGACGATGTTAGCGATGATTTCTCTCTTCAGTTGAGGAGGGAGCTTGAGAGCAATACTGAAAAGAACTAA 1530 0.5275 MSSNPNPIPPPPPDRRRPLSFPAVHPSDSTSPSTLLSSLLTLSQTILHLSPFFTNRRNAREATRQVSLLLLFLQDLRPSLLPNDAVSSLSDLHFAFQNLHFLLHDCARQGPRLFMLLKSRHVASLFRSVFRAVATALESLPLQKIEVCWEVRELVELVTKQARKARGVIFETVDFTSLKNAESSETRRGGGTEVLSCERRPPEDFRCPISLEMMTDPPESQRKPVANREAGSPAAAHAVQFLCWFLARRLVFGTEEQQNKAAYEARLLARSNIFNRTCLIEVGVVPPLLDLLASGDTIMQENAMASLLKLSKHGNGQKCIMESRVPALVGVLSSSLDKADLATDCLAVLAALAESSEGSRAVLQAEALHLIVMILQSVTSRAAKEHCVSILMSVCVHFGAEVVGHLVEEPSLMPLLYSILTDGTPHAAKKARLRFTYGHGTKAATEDVKIDLFEDDDEFEEFEINEEWDDKEEGKEVIQQWEDDWDDDDVSDDFSLQLRRELESNTEKN* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2241 509 Gene3D - 224 448 IPR011989 -
Aev08g2241 509 SUPERFAMILY ARM repeat 254 425 IPR016024 -
Aev08g2241 509 Pfam DSS1/SEM1 family 446 503 IPR007834 GO:0006406|GO:0008541|GO:0043248
Aev08g2241 509 PANTHER OS07G0532750 PROTEIN 325 434 - -
Aev08g2241 509 PANTHER U BOX DOMAIN-CONTAINING 225 324 - -
Aev08g2241 509 MobiDBLite consensus disorder prediction 1 19 - -
Aev08g2241 509 PANTHER OS07G0532750 PROTEIN 225 324 - -
Aev08g2241 509 PANTHER OS07G0532750 PROTEIN 13 164 - -
Aev08g2241 509 PANTHER OS07G0532750 PROTEIN 166 217 - -
Aev08g2241 509 SMART DSS1_SEM1_2 445 504 IPR007834 GO:0006406|GO:0008541|GO:0043248
Aev08g2241 509 PANTHER U BOX DOMAIN-CONTAINING 13 164 - -
Aev08g2241 509 PANTHER U BOX DOMAIN-CONTAINING 166 217 - -
Aev08g2241 509 PANTHER U BOX DOMAIN-CONTAINING 325 434 - -
Aev08g2241 509 Pfam Armadillo/beta-catenin-like repeat 275 303 IPR000225 GO:0005515
Aev08g2241 509 MobiDBLite consensus disorder prediction 1 29 - -
Aev08g2241 509 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 323 367 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2241 Aev-Chr8 21558683 21565182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2241 230 431 U-box Gene Family AT1G60190 27.797 5.69e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2241 - - adu:107491382 207.223