Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2217 ATGGGTGGAAACGGTAAGCACCGTTGGAAAATCTCCTTCCATCGTTCATCTTCATCTTCAAATTCCAAAGTGGAGCAGCAACACAAACATCCTCCGAACGAGTTCCTATGCCCCATTTCCGGGTCGTTAATGTCCGACCCGGTTGTCGTCTCTTCGGGTCAAACCTTCGAGCGCATCTCCGTCCAAGTCTGCTTAGACCTCAATTTCGCCCCCACCCTTCCCGACGGAACCCGACCCGATTTCTCAACCCTTATTCCTAACCTCGCTATCAAAACCACTATCCTTAACTGGTGTCGTGACTCCAAAACGCTGCACCCGCCCGCACCGGATTACTCCTCCGTCGAGCGAATCGTTCGCGCTGCAATGGCCGCCGCCGCGCCTCCGCCGGACCCCGAAATTAGGGTTTCTGAGAAGGAGCTGCTGAAGGCCGTGGCGGATAATCCGCCGGTGATATTCTCACATGCTGCCACCGAGTTAGGCCACCGAGTCAACCACTTTAACTCGGGTCATCTGAGGAGTCCGTTCGAGGTCGAGATCCATGGGCAGAACCCTAACCTCCCTGTCTCGGAGGAGGAAGAGAAATTGCTAGCGAAGATGAAGAGCAGCGAGGTTTTCGAGCAGGAAGAAGGAGTGATCTCGCTTCGCAGCGTCACGAGGAACAGCGATGAAGCTAGGGTTTCGCTGTGCACGCCGCGTTTGCTCCACGCGCTGCGGTCGCTGGTGGCGTCGCGATACGGCGTCGTTCAGGTCAACGCGGTTGCCTCATTGGTCAACCTTTCGCTGGAGAGAGTCAACAAGGTGAAGATCGTGCGGTCAGGATTCGTTCCTTTCTTGATCGACGCGCTGAAGGGAGGATCCGCTGAGACGCAGGAGCACGCTGCGGGCGCGCTCTTCAGTTTAGCTCTCGACGACGATAACAAGATGGCGATTGGAGTTCTCGGCGCGTTGGAGCCGTTGATGCACGCGCTCCGATCCGAGTCCGAGCGGACTCGGCACGACTCGGCGCTTGCTCTGTACCACCTGACTCTGGTTCAGAGCAACCGAGTCAAGCTCGTCAAACTCGGCGTGATCCCCACGCTCCTCTCGATGGTGAAATCCGGCGCGTTGGCGAGTAGGGTTTTGCTCATTCTTTGCAATCTCGCGGTTTCTACGGAGGGGAGGACGGCTATGCTGGACGCGGACGCAGTGGGGTGTTTCGTGGGGATGATGAGGGGGAGCGAGTTGGACTCCGAGTCGACTCGGGAGAACTGTGTTGCGGCTCTCTACGCGCTGAGTCATAGGAGCATGAGGTTTAAGGGGCTTGCCAGGGAGGCTGGGGTGGTGGAGGTGTTGAAGCAGGTGGAGGAGACTGGGACTGATCGGGCGAGGGAGAAGGCCAAGAGGGTGTTGCAGATGATGAGGGCCGGTGGTGATGGTGAAGACGAGGAAGGGTTTGATCTTGACTCGGTATTGGAATCCGGCGGGTTCACTCGGACGAGGCACAGGGTTGGTGGTGGTGGTGGTGGTTTTGGGAGGAGTAATAATATCAACCATTACAATTCCACTACATTTTAG 1554 0.5701 MGGNGKHRWKISFHRSSSSSNSKVEQQHKHPPNEFLCPISGSLMSDPVVVSSGQTFERISVQVCLDLNFAPTLPDGTRPDFSTLIPNLAIKTTILNWCRDSKTLHPPAPDYSSVERIVRAAMAAAAPPPDPEIRVSEKELLKAVADNPPVIFSHAATELGHRVNHFNSGHLRSPFEVEIHGQNPNLPVSEEEEKLLAKMKSSEVFEQEEGVISLRSVTRNSDEARVSLCTPRLLHALRSLVASRYGVVQVNAVASLVNLSLERVNKVKIVRSGFVPFLIDALKGGSAETQEHAAGALFSLALDDDNKMAIGVLGALEPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVIPTLLSMVKSGALASRVLLILCNLAVSTEGRTAMLDADAVGCFVGMMRGSELDSESTRENCVAALYALSHRSMRFKGLAREAGVVEVLKQVEETGTDRAREKAKRVLQMMRAGGDGEDEEGFDLDSVLESGGFTRTRHRVGGGGGGFGRSNNINHYNSTTF* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2217 517 CDD RING-Ubox 36 83 - -
Aev08g2217 517 PANTHER U BOX DOMAIN-CONTAINING 1 132 - -
Aev08g2217 517 PANTHER U BOX DOMAIN-CONTAINING 182 500 - -
Aev08g2217 517 SUPERFAMILY ARM repeat 193 466 IPR016024 -
Aev08g2217 517 ProSiteProfiles U-box domain profile. 30 104 IPR003613 GO:0004842|GO:0016567
Aev08g2217 517 MobiDBLite consensus disorder prediction 495 517 - -
Aev08g2217 517 Gene3D - 188 465 IPR011989 -
Aev08g2217 517 SMART Ubox_2 34 97 IPR003613 GO:0004842|GO:0016567
Aev08g2217 517 Pfam Armadillo/beta-catenin-like repeat 265 301 IPR000225 GO:0005515
Aev08g2217 517 Pfam Armadillo/beta-catenin-like repeat 303 342 IPR000225 GO:0005515
Aev08g2217 517 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 106 IPR013083 -
Aev08g2217 517 MobiDBLite consensus disorder prediction 1 36 - -
Aev08g2217 517 SUPERFAMILY RING/U-box 16 104 - -
Aev08g2217 517 Pfam U-box domain 32 100 IPR003613 GO:0004842|GO:0016567
Aev08g2217 517 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 38 1 132 - -
Aev08g2217 517 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 38 182 500 - -
Aev08g2217 517 SMART arm_5 344 382 IPR000225 GO:0005515
Aev08g2217 517 SMART arm_5 383 426 IPR000225 GO:0005515
Aev08g2217 517 SMART arm_5 262 302 IPR000225 GO:0005515
Aev08g2217 517 SMART arm_5 303 343 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2217 Aev-Chr8 21360214 21361856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2217 1 498 U-box Gene Family AT5G65200 55.839 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2217 - - aip:107643932 738.028