Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2199 ATGGAAACAGATCCATCCATGTCTTCTCCGCCACCTCCCGCTGCCACCGATCCCTCTTCTCGTCACCACACCTACAACCGCAAGCAAAAATCCCTCGGCCTCTTGTGCACCAAGTTCTTGAGTTTGTATGATCGGGAGGATGTCCACTTGATCGGACTCGATGATGCCGCCGCTCGATTAGGGGTGGAGAGGCGGCGGATCTATGATATAGTCAATGTTTTGGAGAGTATCGGGATGCTTGCGAGAAAAGCCAAGAATCAGTACACTTGGAAAGGGTTTGGTGCAATTCCTGGGACTTTACAAGAGCTCAAGGACGAGGGTTTGAAGGAGAATCCATATGGTTTTGATGGTGCCACTGACAGTGCAAAGGTTTCTGATGATGAGGATGACGAAGAAACATTGTCCAATCCTAGTACTGGAAGTCAGAATGACAGATCCAATACTAGTTCCTCAGTTGTCAAGTCAAAGACTGAAAACAGAAGGGAAAAATCTCTGGCACTGCTTACTCAGAATTTTGTCAAGCTCTTTATCTGCTCTAATATGGAAATGATTTCCCTCGACGAAGCTGCAAAATTGTTGCTTGGAAATGCCCATAATTCATCAATAATGAGAACAAAAGTCAGACGCCTGTATGATATTGCAAATGTATTGTCTTCCATGAACCTGATTGAGAAGACCCATACAAGAAACACAAGAAAACCAGCATTCAAGTGGTTGGGTTTGAAAGGGAAAACATGTACTGAGTCAGTTGACTCAGCTCATAACTCAACTCTCAACAATGAGTCGAGCAAAAGGATGTTCGGAGATGACATCACAAACATCAGTTTCAAGAGGACCAAGGTGGATTTATTCATGGATGGACACAATAGCAAGAACTCCGGAATGCAAGAAAATGATAGTCGACATGCTCTTTCAGATAAAAGCAATCAAAAGCAAAATGCAAAACAGGCTTCAAGGAACTATCAGTTTGGTCCATTTGCTCCAGCTTTTGTGTCCAAAGTTGGAGGTGCCTCTGAGAGTAGTAGCACTGCAAAGCAAGTGCATGATTGGGAGAGCCTCTCTACGAAACATCGTCCTCAGTATCAAAACCAAGCTATGAAGGACCTGTTCTTTCACTACATGGAAGCATGGAAATCTTGGTACTCTGAAGCTGCAGCGAAGAGGCCGCAGCGACGAGGCCAGTAA 1185 0.4464 METDPSMSSPPPPAATDPSSRHHTYNRKQKSLGLLCTKFLSLYDREDVHLIGLDDAAARLGVERRRIYDIVNVLESIGMLARKAKNQYTWKGFGAIPGTLQELKDEGLKENPYGFDGATDSAKVSDDEDDEETLSNPSTGSQNDRSNTSSSVVKSKTENRREKSLALLTQNFVKLFICSNMEMISLDEAAKLLLGNAHNSSIMRTKVRRLYDIANVLSSMNLIEKTHTRNTRKPAFKWLGLKGKTCTESVDSAHNSTLNNESSKRMFGDDITNISFKRTKVDLFMDGHNSKNSGMQENDSRHALSDKSNQKQNAKQASRNYQFGPFAPAFVSKVGGASESSSTAKQVHDWESLSTKHRPQYQNQAMKDLFFHYMEAWKSWYSEAAAKRPQRRGQ* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2199 394 MobiDBLite consensus disorder prediction 135 154 - -
Aev08g2199 394 PANTHER E2F TRANSCRIPTION FACTOR-LIKE E2FF 19 384 - -
Aev08g2199 394 SUPERFAMILY "Winged helix" DNA-binding domain 162 241 IPR036390 -
Aev08g2199 394 Gene3D - 22 95 IPR036388 -
Aev08g2199 394 Gene3D - 154 242 IPR036388 -
Aev08g2199 394 MobiDBLite consensus disorder prediction 1 26 - -
Aev08g2199 394 SMART E2F_TDP_2 160 240 IPR003316 GO:0005667|GO:0006355
Aev08g2199 394 SMART E2F_TDP_2 27 92 IPR003316 GO:0005667|GO:0006355
Aev08g2199 394 SUPERFAMILY "Winged helix" DNA-binding domain 26 90 IPR036390 -
Aev08g2199 394 MobiDBLite consensus disorder prediction 287 317 - -
Aev08g2199 394 MobiDBLite consensus disorder prediction 108 160 - -
Aev08g2199 394 MobiDBLite consensus disorder prediction 1 17 - -
Aev08g2199 394 Pfam E2F/DP family winged-helix DNA-binding domain 28 92 IPR003316 GO:0005667|GO:0006355
Aev08g2199 394 Pfam E2F/DP family winged-helix DNA-binding domain 162 240 IPR003316 GO:0005667|GO:0006355
Aev08g2199 394 PANTHER TRANSCRIPTION FACTOR E2F 19 384 IPR015633 GO:0000978|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2199 Aev-Chr8 21184368 21196977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2199 13 97 E2F-DP Transcription Factor Family AT3G48160 34.653 3.32e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Aev08g2199 E2F_TDP 1.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2199 K09391 - qsu:112020170 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2055 01 25151472 25153937 Aev08g2199 08 21184368 21196977 PCT