Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2193 ATGGCCGCTGCACTATGCGATGTTTTCAGGCAGACCTTGCCGGAGGTATCAGCACGTGAGCTTCACGTGCTCGCCGTTGATGACAGCCATGTCGATCGCAAGGTCATTGAACGCTTGCTCAAAATCTCTTCATGCAAAGTCACTGTGGTGGAAAGTGGAACTAGAGCCTTACAGTATCTTGGCTTGGATGGGGACAATTCTGATGCCTCCATTGCTTTTGAAGATAGCGTGAAGGTTAATCTGATTATGACAGACTATTCGATGCCGGGGATGACAGGATTTGAACTCCTCAAGAAGATCAAGGAGTCATCTGTTTTTAGAGAGATTCCGGTTGTGGTTATGTCTTCTGAGAATATATTGACCCGAATTGATAGTTGCTTGGAAGAAGGAGCAGAAGAGTTTCTGTTGAAACCTGTGAAGCTGGCTGATGTAAGACGCGTAACGGATTTCGTCATGAGAGGCGAAGGGAAGGAAGGAGGTAAAAGATGTCAGAAAAGACGGCGATCGGAAGATTGCAGTAGTCCCTCTCTATCAGCTGAACTCTCACCATTGTCCTCAAAGAAATCTAGACTCTAA 576 0.4618 MAAALCDVFRQTLPEVSARELHVLAVDDSHVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGDNSDASIAFEDSVKVNLIMTDYSMPGMTGFELLKKIKESSVFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLADVRRVTDFVMRGEGKEGGKRCQKRRRSEDCSSPSLSAELSPLSSKKSRL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2193 191 MobiDBLite consensus disorder prediction 174 191 - -
Aev08g2193 191 ProSiteProfiles Response regulatory domain profile. 22 152 IPR001789 GO:0000160
Aev08g2193 191 SMART REC_2 21 148 IPR001789 GO:0000160
Aev08g2193 191 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 17 186 - -
Aev08g2193 191 MobiDBLite consensus disorder prediction 156 173 - -
Aev08g2193 191 Pfam Response regulator receiver domain 23 145 IPR001789 GO:0000160
Aev08g2193 191 CDD REC_typeA_ARR 23 147 - -
Aev08g2193 191 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 186 IPR045279 GO:0009736
Aev08g2193 191 Gene3D - 21 190 - -
Aev08g2193 191 MobiDBLite consensus disorder prediction 156 191 - -
Aev08g2193 191 SUPERFAMILY CheY-like 20 153 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2193 Aev-Chr8 21147421 21149574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2193 5 166 Response Regulator Gene Family AT3G48100 69.136 8.57e-75 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev08g2193 Response_reg 3.5e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2193 K14492 - gmx:100306152 265.774