Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2183 ATGGCGGAAGAGAATGAAGAAATAAAAACATTTAAGGATTTGGGCTTGTCTGAGCCATTGGTGGAAGCATGTGAAAAACTCGGATGGATGAATCCATTAAAAATACAGGCAGAAGCAATTCCTCTTGCACTACAAGGAAAAGATGTTATTGGACTTGCTCAAACAGGTTCTGGTAAGACTGGAGCTTTTGCACTTCCCGTATTGCATGCCCTCTTAGAAGCCCCACGCCCCAAAGATTTCTTTGCCTGTGTATTGTCTCCCACAAGAGAGCTTGCTATTCAAATTGCTGAGCAGTTTGAAGCTCTAGGTTCTGAAATTGGTGTCAAGTGTGCTGTGCTTGTTGGAGGTATTGACATGGTACAACAATCTATCAAGATAGCAAAGCAGCCGCATATTATTGTTGGAACACCTGGACGAGTTTTAGATCACCTAAAAAATACCAAAGGATTTTCGCTTAGTAGACTAAAGTATTTGGTCCTAGATGAGGCAGACAGGCTGTTGAATGAGGACTTTGAGGAATCACTTAATGAGATTTTACAAATGATTCCTCGTGAGAGGAGAACATTTCTGTTTTCTGCTACGATGACTAAGAAGGTCCAGAAGCTCCAAAGAGTTTGTTTGAGGAATCCTGTCAAGATTGAAGCTGCATCTAAGTACTCTACAGTTGACACACTGAAGCAGCAGTATCGCTTCCTACCTGCCAAACACAAGGATTGTTACCTTGTATACATTCTCACTGAAATGGCTGGAAGTACAGCAATGGTGTTCACCCGTACATGCGATGCAACTCGGCTTCTGGCTTTGATTCTTAGGAATCTTGGACTAAAAGCCATCCCAATTAATGGTCATATGAGCCAGTCAAAGAGGCTCGGAGCCTTGAATAAGTTCAAGTCAGGGGAGTGTAACATTCTCCTTTGTACTGATGTAGCTAGTAGAGGATTGGATATACCGACCGTAGATGTTGTGATTAACTATGACATCCCCACAAATTCCAAAGATTACATACATCGTGTGGGAAGGACAGCTCGTGCCGGTCGCTCTGGGGTTGCCATTTCGCTTGTGAACCAATATGAGCTGGAGTGGTACATTCAAATAGAGAAACTTATAGGCAAGAAGTTACCAGAGTATCCTGCACAAGAAGAGGAAGTTTTGCTTTTGGAAGAGCGCGTTAGTGAGGCCAAACGATTATCAGTAATGAAAATGAAGGAGTCTGGTGGGGGGAGGAAGAAAAAGAGAGGGGGAGAGGATTATGATGAGGAAAATATTGACAATTACCTAGGTCTTAAGGATAAAAAATCATCTTCCAAGAAGTTTAGAAGATGA 1323 0.4233 MAEENEEIKTFKDLGLSEPLVEACEKLGWMNPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPVLHALLEAPRPKDFFACVLSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSLSRLKYLVLDEADRLLNEDFEESLNEILQMIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAGSTAMVFTRTCDATRLLALILRNLGLKAIPINGHMSQSKRLGALNKFKSGECNILLCTDVASRGLDIPTVDVVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPAQEEEVLLLEERVSEAKRLSVMKMKESGGGRKKKRGGEDYDEENIDNYLGLKDKKSSSKKFRR* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2183 440 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 9 37 IPR014014 GO:0003724
Aev08g2183 440 PANTHER BNAC02G41920D PROTEIN 2 420 - -
Aev08g2183 440 SMART helicmild6 264 345 IPR001650 -
Aev08g2183 440 SMART ultradead3 28 228 IPR014001 -
Aev08g2183 440 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 159 167 IPR000629 -
Aev08g2183 440 Gene3D - 219 391 IPR027417 -
Aev08g2183 440 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 40 213 IPR014001 -
Aev08g2183 440 CDD SF2_C_DEAD 225 354 - -
Aev08g2183 440 Gene3D - 1 218 IPR027417 -
Aev08g2183 440 PANTHER RNA HELICASE 2 420 - -
Aev08g2183 440 Pfam Helicase conserved C-terminal domain 240 345 IPR001650 -
Aev08g2183 440 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 240 384 IPR001650 -
Aev08g2183 440 CDD DEADc_DDX47 10 214 IPR044765 GO:0005524
Aev08g2183 440 MobiDBLite consensus disorder prediction 397 419 - -
Aev08g2183 440 Pfam DEAD/DEAH box helicase 34 202 IPR011545 GO:0003676|GO:0005524
Aev08g2183 440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 366 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2183 Aev-Chr8 21041453 21047177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2183 6 377 Eukaryotic Initiation Factors Gene Family AT3G19760 32.181 1.24e-64 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2183 K14777 - gmx:100775796 783.482