Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2177 ATGGATCCTCCTCTGATTAACGACGCTACATTCTCCGCCGCTAACCCTTCCTCTTACACGCTCTCCGAGATTTGGCCTTTTTCCGCCACCGACGGAGGATTGGGTCTCCGCATCCCCAATTTCCCTCACAATGCTCCTAACTTCACTTCCTTCCCCGACGCTTCGCATTCCGCCATCATCAGAGACGCCGCCGCCTCCGCCGAGGAGTCCACCGTCACGGACCAGAGCGCCGCCGCCGCCACCAGAAATCACCGCAAGAGGAAGGATGCTCCTGCTTCTGAGGACGACTCCTCAAAGATGCTTTCCACCAGTACCGCTACTGATTTGAATGATTCTGACAATAAACGGATAAAATTAGGAGGATCCACCAGTGAAAATGAAGGTTCGAAAGTAGAAGCAGAAGCAAGTTCGGCAGCTGGTAATAAGTCAGCTGAAAAAAGCAATAAACCATCCGAGCCGCCTAAGCAAGACTATATTCATGTGAGAGCAAGAAGAGGCCAAGCTACCGATAGCCACAGTTTAGCAGAGAGAGCAAGAAGGGAAAAAATCAGTGAGAGGATGAAAATTCTTCAGGATTTAGTCCCAGGGTGTAACAAGGTAATTGGTAAAGCACTTGTCCTGGATGAGATAATCAATTACATCCAGTCGCTGCAGCGTCAGGTTGAGTTCCTTTCGATGAAGCTTGAAGCAGTTAATTCAAGATTTAACATGAACCCTACTATTGAAGGGTTCCCTTCAAAAGATGTGGGTTCTCAGCCATTCGACGTCGCCGGAATGATATTTGGATCACAAGCAGCAAGGGGGTATGCTCAGGGATCACAACCTGGATGGCTGCATATGCAGATAGGTGGTGATTTCGGCAGAGCAACATAA 873 0.4903 MDPPLINDATFSAANPSSYTLSEIWPFSATDGGLGLRIPNFPHNAPNFTSFPDASHSAIIRDAAASAEESTVTDQSAAAATRNHRKRKDAPASEDDSSKMLSTSTATDLNDSDNKRIKLGGSTSENEGSKVEAEASSAAGNKSAEKSNKPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRFNMNPTIEGFPSKDVGSQPFDVAGMIFGSQAARGYAQGSQPGWLHMQIGGDFGRAT* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2177 290 Coils Coil 214 234 - -
Aev08g2177 290 MobiDBLite consensus disorder prediction 80 95 - -
Aev08g2177 290 SMART finulus 173 223 IPR011598 GO:0046983
Aev08g2177 290 CDD bHLH_AtBPE_like 157 240 - -
Aev08g2177 290 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 165 237 IPR036638 GO:0046983
Aev08g2177 290 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 290 IPR024097 GO:0006355
Aev08g2177 290 MobiDBLite consensus disorder prediction 96 110 - -
Aev08g2177 290 Pfam Helix-loop-helix DNA-binding domain 171 218 IPR011598 GO:0046983
Aev08g2177 290 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 167 217 IPR011598 GO:0046983
Aev08g2177 290 PANTHER BNAC05G07950D PROTEIN 1 290 - -
Aev08g2177 290 Gene3D - 164 240 IPR036638 GO:0046983
Aev08g2177 290 MobiDBLite consensus disorder prediction 65 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2177 Aev-Chr8 20986951 20990426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2177 1 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 55.782 1.39e-94 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev08g2177 HLH 2.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2177 - - lang:109336984 385.571