Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2173 ATGGTGAAATCTCCATGCTGTGAAAAAATCAGTGTCAAAAGGGGTGTGTGGAGTGCAGAAGAAGATGCAAAGATTCTTGCATTTGTCTCAAAGCATGGATCTGGTAACTGGACTTCTGTCCCCAAAAAAGCAGGGCTTAAGAGGTGTGGAAAGAGTTGCAGGCTTAGGTGGACCAACTACCTTAGGCCAGATCTTAAGCATGATAACTTCACACCCCAAGAAGAAGATCTCATCATTAAGCTTCATGCAGCCATAGACCCTGTTACTCATAAGCCATTCTCCAAGCTCATTGCTGACTATGGAAACATTGGTGGTGGCTGCCAGAAACAAAGTAGCAGCAGCAGCAGCAAAATTGGTGGATCTGTCAATAAGGACTTAAAAAATGCAATGATGCTCAAGTCAGAGCCATATCATCAAACTCTGCCACTTAGAACCATCAATAACAACCAGCCCCCTAAAATGGAACCAAATGAAACCAATTTCTTATTTAACAGAAATCATAATGATGATCATAACAATAATCATAATAGCCCTTCACCTTCTTCTTCTTCTTCTAACTGTTCCACCACTACAGCACAAGAAGCCTTGCCTTTGTCATTCAGTTGGAATGATTTTCTTCTAGAAGATGCATTTGCACCAACAATACCACTTGGTGATAACCATGAGCATGACATGGTGGTGGGTGGTTTCATGTCAAAGGACTTGTTGGTGAGCCATATGGAAAATGTGACAAGACAAAGTTGGAATAAGAAAGAGGTTAAGTCATTGAAATTAGGTAATAATACCAATGACTTTCATCACTTTTCATCATCATCATCATCATTTGTAGAAGCTATGCTTGATCAAGAAAATGAGATGTTTCTTAGTTTTCCTCATCTTATGGAGGAACCACCTAATTACTGA 903 0.3987 MVKSPCCEKISVKRGVWSAEEDAKILAFVSKHGSGNWTSVPKKAGLKRCGKSCRLRWTNYLRPDLKHDNFTPQEEDLIIKLHAAIDPVTHKPFSKLIADYGNIGGGCQKQSSSSSSKIGGSVNKDLKNAMMLKSEPYHQTLPLRTINNNQPPKMEPNETNFLFNRNHNDDHNNNHNSPSPSSSSSNCSTTTAQEALPLSFSWNDFLLEDAFAPTIPLGDNHEHDMVVGGFMSKDLLVSHMENVTRQSWNKKEVKSLKLGNNTNDFHHFSSSSSSFVEAMLDQENEMFLSFPHLMEEPPNY* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2173 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aev08g2173 300 SMART sant 13 63 IPR001005 -
Aev08g2173 300 PANTHER F14D16.11-RELATED 1 85 - -
Aev08g2173 300 PANTHER F14D16.11-RELATED 85 299 - -
Aev08g2173 300 SUPERFAMILY Homeodomain-like 16 87 IPR009057 -
Aev08g2173 300 PANTHER F14D16.11-RELATED 1 85 - -
Aev08g2173 300 PANTHER F14D16.11-RELATED 85 299 - -
Aev08g2173 300 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev08g2173 300 MobiDBLite consensus disorder prediction 173 190 - -
Aev08g2173 300 CDD SANT 17 61 IPR001005 -
Aev08g2173 300 MobiDBLite consensus disorder prediction 137 190 - -
Aev08g2173 300 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev08g2173 300 MobiDBLite consensus disorder prediction 140 163 - -
Aev08g2173 300 Gene3D - 7 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2173 Aev-Chr8 20950277 20952210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2173 1 296 MYB Transcription Factor Family AT3G28470 35.882 5.64e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev08g2173 Myb_DNA-binding 4.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2173 K09422 - gmx:100795381 284.648