Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2137 ATGGATCGGTTTTGTTCCGAAAGATCAAGCCATGGCCGTGGCCATGAAAGTGGTGATGATGATGATGATGCGATAATCGCCAAGGATGAGAAGAAGAGAAGTGATGATGAGTCGAGTGATGGTGGTGATGATGAAGATAATGATCGTCTAAAACAAGAGGCTTCTCTTGAGATACCATCCATGGCTAAGACTGAAAAATCCGTGCTAGAGGCTGTGCCAATTTGTGCATCCTCAGCCAAAAAGGAAGAGGTTGATGAACTTGAAAGTGCCAAAGCCGAAATGGGTGAAGTGATAGAGGAAAACCAAAGGTTAAAGATGTGTTTGAACCGAATATTGAATGATTACAAGACACTACAAGTGCAATTCCACAACATAGTTCAACAAGATCATACAAAAAACCCTCCTCCTAATAATAATAATAAAGCAAATGATGATGGTACTGAAAATAAAAGCCATCATCAAAAAATGTTATTAGAGGAATCAGAGCTAGTTTCCCTAAGCCTTGGAAGGCTACCAAGAAGTGAAGAGAAGGCAAATAATAAAGTGTCTAAACCATCATTGAAAGAGGGAGTAGAATGTAATAAAGAAGAAGAAGAAGGGTTGGAACTTGGATTGGAGTGCAAATTTGAGACATCAAAGTCAGAAAGCACAACTGAACATTATTTGCCAAATAACAATAGTAATGCAATTATTAGCCCAGCAAATAGTTCTGAAGGACCAAAGGAGGAAGAACCTGGGGAAACTTGGGCACCAAGCAAAGTGCTAAAGACTAGTAGTACAAGTAGAGATGGTGGAGCAGAGGATGAAGTTTCACAACAGAGTCCTGCGAAGAAAGCTAGAGTTTGTGTTAGAGCAAGATGCGACACTCCAACAATGAATGATGGATGTCAATGGAGGAAATATGGGCAAAAGATTTCAAAGGGAAATCCTTGTCCTCGAGCTTATTATCGTTGCACTGTTGCACCATCTTGCCCCGTAAGAAAGCAGGTGCAAAGATGTGCACAAGACATGTCAATTCTAATAACCACCTATGAAGGCACACACAACCACCCTCTCCCACTCTCAGCCACAGCCATGGCCTCCACAACTTCTGCAGCTGCTTCCATGCTCCTCTCTGCCTCCTCATCCTCCTCTCACCACCCCTCTTCCTCATCACTCCCTTCATCAATATCCACAACTTCTTCTCATCCTTCTCCCAATAACCTCCATGCCATGAACTTCTTCCTCTCAGACACTTCCTCCAAATCAAGACATCCTCAATTCTACCTCTCACACCCTTCCCTCTCATCTTCACCTTCACACCCAACAATCACTCTTGACCTCACAACTTCATCTTCTTCTTCCTCCTCTGCCCCTTTTGCCAGATTCAACACAAACTTCCATAATAATCATAATAAATACCCTGTTTCTTCCACTAGCCTCAATTTCAGTATCAACAACAATAATAGTAATAATAATCCCTCAGAATTACAAAATGCTATTTCTTGGACCAATAACAATAATGGATTCCTCACCTACAATAACAGAAACATACTTGGCACCATGAACCTCGGAAGATCATCATCATCATCACAACAAATTGAAAACTTGTACCAATCCTTCATGATGCAAAGAAACAACAACAATGTTCCAATAATCTCTTCTCATCAAACTTCTGTTCTTCCAGACACAATTGCAGCAGCAACAAAAGTGATCACTGCAGACCCAAATTTTCAATCAGCACTAGCAGCAGCACTCACTTCAATTATCAGCACACAGCAAGGAAACAACAACAACAACCTGCAGAGTGGTGGTGGAGAAAACTTATTGGGTCAGAAAATGATGAAATGGGGGAATAATAATTTGGTGTTTCTAGCATCGCCATCTTTACCATTCTCTGGCACCAAAAGTGCATCTGGGTCTCCTCCTGGTGATAACAGAGACAAGAACACCAATTGA 1938 0.4138 MDRFCSERSSHGRGHESGDDDDDAIIAKDEKKRSDDESSDGGDDEDNDRLKQEASLEIPSMAKTEKSVLEAVPICASSAKKEEVDELESAKAEMGEVIEENQRLKMCLNRILNDYKTLQVQFHNIVQQDHTKNPPPNNNNKANDDGTENKSHHQKMLLEESELVSLSLGRLPRSEEKANNKVSKPSLKEGVECNKEEEEGLELGLECKFETSKSESTTEHYLPNNNSNAIISPANSSEGPKEEEPGETWAPSKVLKTSSTSRDGGAEDEVSQQSPAKKARVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAQDMSILITTYEGTHNHPLPLSATAMASTTSAAASMLLSASSSSSHHPSSSSLPSSISTTSSHPSPNNLHAMNFFLSDTSSKSRHPQFYLSHPSLSSSPSHPTITLDLTTSSSSSSSAPFARFNTNFHNNHNKYPVSSTSLNFSINNNNSNNNPSELQNAISWTNNNNGFLTYNNRNILGTMNLGRSSSSSQQIENLYQSFMMQRNNNNVPIISSHQTSVLPDTIAAATKVITADPNFQSALAAALTSIISTQQGNNNNNLQSGGGENLLGQKMMKWGNNNLVFLASPSLPFSGTKSASGSPPGDNRDKNTN* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2137 645 Gene3D WRKY domain 276 354 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev08g2137 645 MobiDBLite consensus disorder prediction 214 275 - -
Aev08g2137 645 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 57 636 - -
Aev08g2137 645 Coils Coil 80 100 - -
Aev08g2137 645 MobiDBLite consensus disorder prediction 127 153 - -
Aev08g2137 645 ProSiteProfiles WRKY domain profile. 287 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev08g2137 645 MobiDBLite consensus disorder prediction 372 397 - -
Aev08g2137 645 SMART WRKY_cls 292 352 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev08g2137 645 Pfam WRKY DNA -binding domain 293 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev08g2137 645 MobiDBLite consensus disorder prediction 1 68 - -
Aev08g2137 645 MobiDBLite consensus disorder prediction 216 235 - -
Aev08g2137 645 MobiDBLite consensus disorder prediction 1 53 - -
Aev08g2137 645 MobiDBLite consensus disorder prediction 419 449 - -
Aev08g2137 645 MobiDBLite consensus disorder prediction 626 645 - -
Aev08g2137 645 SUPERFAMILY WRKY DNA-binding domain 285 353 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev08g2137 645 MobiDBLite consensus disorder prediction 252 268 - -
Aev08g2137 645 MobiDBLite consensus disorder prediction 127 144 - -
Aev08g2137 645 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 57 636 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2137 Aev-Chr8 20578124 20587395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2137 94 599 WRKY Transcription Factor Family AT5G15130 39.927 9.41e-79 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev08g2137 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2137 - - gmx:100804403 473.011