Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev08g2134 | ATGGGGAAATCACCGGGAAGATGGATCAAAACCGTACTATTTGGAAAAAAGTCTTCCAAATCAAATGTTTCGAAAGGAAGAGAGAAGCTTGTTAATAGAAAAGAAACAGTAGTTACTTCCAACTTGTCGGAAAACGATTTGGCTTTAGATCCATCCCCAAATACAATTGTCATAAATGAGGAGGACATAGAGGTGGAGAATAGAGAAGCAGAGAATGTCTTGCCTGGGAATCAAGAAATCGACACTATGGGATCTGTTGACCAAGATGCAACACCTGATCCAGAGAAAATCAGGCTGGAAGAAGCGGCAACAAAGGCACAAGCTGCTTTCAGGGGCTACTTGGCTCGTAGGGCATTTAGGGCCCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACTTGGTAAGGAGACAAGCTGTTGCTACGTTATGCTCCATGTATGCGATTGTCAAGTTACAAGCATTTGTTCGGGGAAGAAGAGCTAGACAGACTGATGCTGGTTTTCAAATCCAAGAGAAGTATACTCTATTTAAGCCCCCGGGTGCCAAACTTGGTGAGGCAGTTGCTATATCCACAAAAATTGCTCAGCTGTCAGTAAATACCTTCATCCGTAAGCTTCTTGCTTCATCAACAACAAGTGCCTTGCACCTGCAATATGTTGCTGGGGATCCAAATTCAGTCTCAAGCTGGTTGGAGCGGTGGTCTGCATCTAACTTTTGGAAACCAGTCCCTCAACCCAAGAAAATTCGAGACTCCAAATCTTCAAGAAAGCAAGGTACTAGCTCAATTGGAGATGCTCAAATTAGCAAGTCAAGACGTACCAGGAAGCCTCCTGCAAATTTTGAATCAGTCCCAGCGCAACCAAATCCTGAACTTGAAAAACCAAAACGTAATCCGAGGAAAATTCCAAGCCTACCGTCAGATCCAGTGCAAGAAAATCCACAAAGCGAGCTTGAGAAGGTTAAGCGGAACTTGAGAAAGATTCATAACCCTGTTGTTGAGAATGCTGTTCCGGCAGAAGTTGAATCTGAGGCCCCAAAGCAGAACTTGGAAAAGGCAACAGTTACCGCTGGTCGGGCTGTTTCGGAACAAGTGGTAGTTCCGTCTAAGGACAAGATCAATAAGGAAGCTGTTTTAGAACAAGGTATCATTACTTCTAATGAGAAGATCAGAAAGGAAGCTGATTCAGAACAAGAGGTTATTACTTCTTATGAAAAGATCATGAATGAAGAGGAAACATTGAGCATTTCCAATGTACCTGTTGTAGAAATTACTCCAAGAACTTCAGTTAAGAAGGAGCAGTTTGACATTCCAAGCAGTTATAAAGTGAATTTGGAATCAAAGCCCTTGATAGAGACTACATCTAAAGATAACACTTTTGCTGACGAAGCTAAAAATGAAATGAGTGATCTACCAGAGACTATCTATAAAGATGAAAATTCTCCATTAGCAAATGGAGAGATGAATCATAAGGATGATCAAAAGGGCAATGAAAACCAGAAACCTACCCGGAAATCCTCAGCATTGGCAAAGCAGGATCGCGCCGAGAATGGTTTACAGAGTAGTCCTACATTACCAAGCTATATGGCAGCAACTGAATCTGCCAAGGCAAAGTTGAGGGCACAAGGGTCCCCGAAGTTTGGACAAGATGGAAGTGAGAGAAACAGCCCTGCTGGGCGACTTTCACTGCCATCTTCTGTTAACAGCAAAATTAGTTCACATTCACCTCGGACACAGAGATCAGGTCAATCAGGTGGCAAAGGGGGCCCCAGAAGTGACAAAGCTGTGCCATCTTCTAAAGGTGGGAATGGGAAGGTAATTCAAGCAGAGTGGAGGAGGTGA | 1848 | 0.4334 | MGKSPGRWIKTVLFGKKSSKSNVSKGREKLVNRKETVVTSNLSENDLALDPSPNTIVINEEDIEVENREAENVLPGNQEIDTMGSVDQDATPDPEKIRLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLCSMYAIVKLQAFVRGRRARQTDAGFQIQEKYTLFKPPGAKLGEAVAISTKIAQLSVNTFIRKLLASSTTSALHLQYVAGDPNSVSSWLERWSASNFWKPVPQPKKIRDSKSSRKQGTSSIGDAQISKSRRTRKPPANFESVPAQPNPELEKPKRNPRKIPSLPSDPVQENPQSELEKVKRNLRKIHNPVVENAVPAEVESEAPKQNLEKATVTAGRAVSEQVVVPSKDKINKEAVLEQGIITSNEKIRKEADSEQEVITSYEKIMNEEETLSISNVPVVEITPRTSVKKEQFDIPSSYKVNLESKPLIETTSKDNTFADEAKNEMSDLPETIYKDENSPLANGEMNHKDDQKGNENQKPTRKSSALAKQDRAENGLQSSPTLPSYMAATESAKAKLRAQGSPKFGQDGSERNSPAGRLSLPSSVNSKISSHSPRTQRSGQSGGKGGPRSDKAVPSSKGGNGKVIQAEWRR* | 616 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev08g2134 | 615 | SMART | iq_5 | 98 | 120 | IPR000048 | GO:0005515 | |
| Aev08g2134 | 615 | SMART | iq_5 | 121 | 142 | IPR000048 | GO:0005515 | |
| Aev08g2134 | 615 | SMART | iq_5 | 150 | 168 | IPR000048 | GO:0005515 | |
| Aev08g2134 | 615 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 603 | - | - | |
| Aev08g2134 | 615 | MobiDBLite | consensus disorder prediction | 486 | 502 | - | - | |
| Aev08g2134 | 615 | Pfam | Protein of unknown function (DUF4005) | 515 | 594 | IPR025064 | - | |
| Aev08g2134 | 615 | MobiDBLite | consensus disorder prediction | 447 | 615 | - | - | |
| Aev08g2134 | 615 | ProSiteProfiles | IQ motif profile. | 99 | 127 | IPR000048 | GO:0005515 | |
| Aev08g2134 | 615 | Gene3D | - | 97 | 171 | - | - | |
| Aev08g2134 | 615 | MobiDBLite | consensus disorder prediction | 460 | 476 | - | - | |
| Aev08g2134 | 615 | Pfam | IQ calmodulin-binding motif | 101 | 120 | IPR000048 | GO:0005515 | |
| Aev08g2134 | 615 | Pfam | IQ calmodulin-binding motif | 123 | 140 | IPR000048 | GO:0005515 | |
| Aev08g2134 | 615 | Pfam | IQ calmodulin-binding motif | 150 | 165 | IPR000048 | GO:0005515 | |
| Aev08g2134 | 615 | PANTHER | PROTEIN IQ-DOMAIN 31 | 1 | 603 | - | - | |
| Aev08g2134 | 615 | ProSiteProfiles | IQ motif profile. | 147 | 175 | IPR000048 | GO:0005515 | |
| Aev08g2134 | 615 | MobiDBLite | consensus disorder prediction | 550 | 588 | - | - | |
| Aev08g2134 | 615 | MobiDBLite | consensus disorder prediction | 515 | 531 | - | - | |
| Aev08g2134 | 615 | MobiDBLite | consensus disorder prediction | 244 | 319 | - | - | |
| Aev08g2134 | 615 | ProSiteProfiles | IQ motif profile. | 123 | 150 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev08g2134 | Aev-Chr8 | 20549605 | 20554150 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aev08g2134 | 1 | 615 | IQD Protein Family | AT1G74690 | 42.902 | 3.71e-113 | 348 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev08g2134 | - | - | gmx:100807118 | 757.673 |