Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2127 ATGGGAAGACCACCTTGCTGTGACAAAATTGGGATTAAGAAAGGACCTTGGACTCCAGAGGAGGACATCATCTTAGTCTCTTACATTCAAGAACATGGTCCTGGCAATTGGAGATCAGTTCCCACCAACACAGGTTTGATGAGATGCAGTAAAAGCTGCAGGCTTAGATGGACCAACTATCTTCGACCTGGTATCAAAAGAGGAAATTTCACTGATCATGAAGAAAAAATGATAATCCACCTCCAAGCTCTTTTGGGTAACAGATGGGCTGCTATAGCTTCTTATCTTCCTCAAAGGACAGACAATGACATAAAAAACTATTGGAACACCCATTTGAAGAAAAAGCTAAAGAAGTCTCAAACTGGTTCTGAAGATTCCAATGAAAATGAATTAGGAAAATCTTCTTCTTCTTCATCATCATCATCATCACATCCAAAAGGTCAGTGGGAAAGAAGGCTCCAAACTGATATCCAAATGGCCAAACAAGCCTTATGTGAAGCCCTTTCCCTTGACAAACCACAACTACATAATCATGAATCCATCAATACTACTAATTCCCTTCTCCAAACAACACAAAATCAATATTCACCAAACCCCACATACATATCAAGTGCTGATAATATAGCAAAATTGCTAGAAAACTGGATGAAGAACACACCAAAATGCTCTGAAACAGCAAACTCTGCATCGGGGAACTCTAGTTCAAGTGAAGGTGGACAGAGCAACATGACTAGTTCTTGCACGCCATCAGAGAATAATAATTATGCAGCATTTGATTTCATGAGCTTCAACAACTCTCCATTCAACTCTGATCATGGATCTCATCACTCTGTTTTGTCGGTTGAAGAGACGAAGCCGAATTTGGAGGTGGAGGAGGAGGAACAAGTGCCTCTAACTTTGCTTGAGAATTGGCTATTTGATGATGGTGGAGTAGCACAATGCAATGAAGATCTGATTATGAGCATGTCATTGGAAGAAAGTACAGTGGGTTTGTTCTAG 999 0.4034 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKSQTGSEDSNENELGKSSSSSSSSSSHPKGQWERRLQTDIQMAKQALCEALSLDKPQLHNHESINTTNSLLQTTQNQYSPNPTYISSADNIAKLLENWMKNTPKCSETANSASGNSSSSEGGQSNMTSSCTPSENNNYAAFDFMSFNNSPFNSDHGSHHSVLSVEETKPNLEVEEEEQVPLTLLENWLFDDGGVAQCNEDLIMSMSLEESTVGLF* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2127 332 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Aev08g2127 332 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev08g2127 332 MobiDBLite consensus disorder prediction 115 150 - -
Aev08g2127 332 CDD SANT 69 112 IPR001005 -
Aev08g2127 332 CDD SANT 16 61 IPR001005 -
Aev08g2127 332 Gene3D - 69 143 - -
Aev08g2127 332 MobiDBLite consensus disorder prediction 222 248 - -
Aev08g2127 332 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev08g2127 332 Gene3D - 13 66 - -
Aev08g2127 332 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev08g2127 332 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aev08g2127 332 MobiDBLite consensus disorder prediction 125 148 - -
Aev08g2127 332 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 317 - -
Aev08g2127 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aev08g2127 332 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 317 - -
Aev08g2127 332 SMART sant 13 63 IPR001005 -
Aev08g2127 332 SMART sant 66 114 IPR001005 -
Aev08g2127 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2127 Aev-Chr8 20419427 20421055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2127 1 332 MYB Transcription Factor Family AT5G62470 52.304 3.84e-116 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev08g2127 Myb_DNA-binding 1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2127 K09422 - gmx:100794319 400.979