Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2124 ATGGATCGTTCATCAGGTGATTACTATGGTAAAGCATTTACTTTGACATATTATATCCGTGTTGATCCCAACCTTTCAATGCAGCTCATTGGTTTATGGATTGAGAGTTTTGGTAAAATAGATTTAATTTGCAAGATACACGAGTTGTCCAACTTTCTCATGATGGATGGGGGAATTACAGAACATGTCCAAAATTATAGCAATGATGGTTCTGATGAGTATTCCAATGATGAGTTCACCAGTAACAGTACAAGTGATGAAGCAGACGAATTACATGAAGCATATTCAACAGATCCATTGAAGGAAATTGGGAGCAGTGTTCGTGATAAAGGGAGTTACAGTTCCCAAGATGAGAATATGCAAATGCCAGAATTTTTGGAGACTTGTGATGAAGATATTGTGGCACCCATTGCATCTGATTTGTTGGAGAAGGAGTTCACATCAAGTAAGGATGCATACAAGCTCTACGTGTCGTATGCTCGAAGTGTTGGCTTTGGTGTAAGAAAGGGGGATGTGAGGCGAAATAAAGCACGCGAAATTACAAGTCGATCATTCTTCTGTTGCAAGGAAGGCCTAAGACTACAAAAGCATTATGTTAGAGATGACCGAAAGAGAGCGCCAAAAGCCGTGACACGCACTAATTGCAAAGCGCGTCTGGTGATATACTTTGACAAAGGGTCGGGAATATGGAAGGTGCGAGAATTCGTCGAAGGGCATAACCATGAGTTGACCCCTAGGAAATTTGTACACCTAATACGCAACCATCGAAAGATCACACCGGCGTACAAGGCACAGATTGATACGATGCACAAGTATGGCATGCAAACATGTCAAATTCTTGGATACATGGCAGGTCAGTGTGGGGGTTACGAAGCCATAGGATTTTCTAAGAAAGATCTGTATAATTACATAGACAAGGAAAGAAGGGGGAAAATAATTGATGGCGATGCGTCTGAGGCAATAAGCTATTTGAAGGGCAGAGCAGATGTAGATGCCAATATAAAGGAGTCATCATTCTGTGAAGCATTCAAGAATTGCATGTACAACAACTATACACCCACCCAATTTGAGGAGAGGTGGCAAGCCATTGTGGAACGGTTCCAGCTGGGTGATAATAGATGGGTTCTTGGTGTTTATGAGAAGAAAGAGATGTGGGCAGCAGCATATTTGCGGGACAAATTTTGTGCTGGAATTCAAACAACCTCAAGATGTGAAGGAATTAATAGTTTTATCAAACGATTCATTAAGTCACGATATAGCATTTTGGAACTTGTTCAAACTCTGGAACTGGTAATAAAAAATTATAGGAACAACGAACTAGAGGCACAATTTCATTCAATCAACACTTTTCCTGTATATGACACTGGGTTACGGTCGATTGAGGAAGCTGCTGCCAAGGTATATACAAGGGCTGTTTTCAAGGAGGTCAAGCAAGAAATTGAGGGGGTGTCCTCCGTCATCATGGTTGGAAAAGAAAGCTTTTCAACACTAGTTAAATATCAGCTTTGTAAATTTGGTCAACCCAACAGGTTGTTTGAGGTTCTCTTTGATAGAGTTGGAGATAATGATGGGCCCAAAATTGAATGTGATTGTCACTTTTGGAGCATGAACGGAATTCCATGTAGTCATGTGTTTTTTGTCATGAAAAATGAACATGTTGCTGAGGTACCAACTAGCCTTGTCATTGGACGGTGGAGAAAAGATGCAAAAACATTTGATGACGATGGGGATGTCGCCGATGAAGATGAGAAGAAACGGAGGCAAATTCTTAGGCAAACATCTACTGACTTGGTTCGTGATGCCCCCGTGCAGCAAAGGATTTTTCTTCATGTTTCCGGTTTCATTGTAGTGGGTCATGTCTGA 1863 0.4117 MDRSSGDYYGKAFTLTYYIRVDPNLSMQLIGLWIESFGKIDLICKIHELSNFLMMDGGITEHVQNYSNDGSDEYSNDEFTSNSTSDEADELHEAYSTDPLKEIGSSVRDKGSYSSQDENMQMPEFLETCDEDIVAPIASDLLEKEFTSSKDAYKLYVSYARSVGFGVRKGDVRRNKAREITSRSFFCCKEGLRLQKHYVRDDRKRAPKAVTRTNCKARLVIYFDKGSGIWKVREFVEGHNHELTPRKFVHLIRNHRKITPAYKAQIDTMHKYGMQTCQILGYMAGQCGGYEAIGFSKKDLYNYIDKERRGKIIDGDASEAISYLKGRADVDANIKESSFCEAFKNCMYNNYTPTQFEERWQAIVERFQLGDNRWVLGVYEKKEMWAAAYLRDKFCAGIQTTSRCEGINSFIKRFIKSRYSILELVQTLELVIKNYRNNELEAQFHSINTFPVYDTGLRSIEEAAAKVYTRAVFKEVKQEIEGVSSVIMVGKESFSTLVKYQLCKFGQPNRLFEVLFDRVGDNDGPKIECDCHFWSMNGIPCSHVFFVMKNEHVAEVPTSLVIGRWRKDAKTFDDDGDVADEDEKKRRQILRQTSTDLVRDAPVQQRIFLHVSGFIVVGHV* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2124 620 ProSiteProfiles Zinc finger SWIM-type profile. 512 552 IPR007527 GO:0008270
Aev08g2124 620 Pfam SWIM zinc finger 526 544 IPR007527 GO:0008270
Aev08g2124 620 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 338 586 IPR031052 GO:0006355
Aev08g2124 620 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 141 326 IPR031052 GO:0006355
Aev08g2124 620 PANTHER OS03G0181600 PROTEIN 338 586 - -
Aev08g2124 620 PANTHER OS03G0181600 PROTEIN 141 326 - -
Aev08g2124 620 MobiDBLite consensus disorder prediction 64 88 - -
Aev08g2124 620 Pfam FAR1 DNA-binding domain 155 244 IPR004330 -
Aev08g2124 620 SMART 26again6 527 554 IPR006564 GO:0008270
Aev08g2124 620 MobiDBLite consensus disorder prediction 64 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2124 Aev-Chr8 20372855 20378502 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev08g2124 FAR1 1.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2124 - - vvi:109122329 305.834