Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev08g2075 | ATGAAGAAGAGACAGGTGGTGCTGAAAAGGGAAGTGGCAAACACTTCATCAACAGTGGTGAGGAATATAAGATATGGAGAGTGTCAGAAGAATCATGCAGCAAATATTGGAGGGTATGCTGTGGATGGATGCAGGGAATTCATGGCAAGTTCAGGGGAAGGAACAAGTGGTGCTCTTACTTGTGCTGCTTGTGGATGCCATAGGAATTTCCATAGAAGGGAAGTTCAAACTGAAGTTGTTTGTGAGTACTCTCCTCCTAATTAA | 264 | 0.4356 | MKKRQVVLKREVANTSSTVVRNIRYGECQKNHAANIGGYAVDGCREFMASSGEGTSGALTCAACGCHRNFHRREVQTEVVCEYSPPN* | 88 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev08g2075 | 87 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 24 | 75 | IPR006456 | - | |
Aev08g2075 | 87 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 25 | 74 | IPR006456 | - | |
Aev08g2075 | 87 | PANTHER | MINI ZINC FINGER PROTEIN 3 | 3 | 87 | - | - | |
Aev08g2075 | 87 | Pfam | ZF-HD protein dimerisation region | 23 | 75 | IPR006456 | - | |
Aev08g2075 | 87 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 3 | 87 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev08g2075 | Aev-Chr8 | 19856989 | 19857252 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev08g2075 | 1 | 87 | Zinc finger-homeobox gene family | AT1G18835 | 76.136 | 2.12e-42 | 131 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | zf-HD | Aev08g2075 | ZF-HD_dimer | 2.9e-30 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev08g2075 | - | - | gmx:100785967 | 166.007 |