Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2075 ATGAAGAAGAGACAGGTGGTGCTGAAAAGGGAAGTGGCAAACACTTCATCAACAGTGGTGAGGAATATAAGATATGGAGAGTGTCAGAAGAATCATGCAGCAAATATTGGAGGGTATGCTGTGGATGGATGCAGGGAATTCATGGCAAGTTCAGGGGAAGGAACAAGTGGTGCTCTTACTTGTGCTGCTTGTGGATGCCATAGGAATTTCCATAGAAGGGAAGTTCAAACTGAAGTTGTTTGTGAGTACTCTCCTCCTAATTAA 264 0.4356 MKKRQVVLKREVANTSSTVVRNIRYGECQKNHAANIGGYAVDGCREFMASSGEGTSGALTCAACGCHRNFHRREVQTEVVCEYSPPN* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2075 87 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 24 75 IPR006456 -
Aev08g2075 87 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 25 74 IPR006456 -
Aev08g2075 87 PANTHER MINI ZINC FINGER PROTEIN 3 3 87 - -
Aev08g2075 87 Pfam ZF-HD protein dimerisation region 23 75 IPR006456 -
Aev08g2075 87 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 3 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2075 Aev-Chr8 19856989 19857252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2075 1 87 Zinc finger-homeobox gene family AT1G18835 76.136 2.12e-42 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev08g2075 ZF-HD_dimer 2.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2075 - - gmx:100785967 166.007