Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2065 ATGGAGAGTCAAAAACAACTCATTGGTTGGACTTGGTACTCCAACAATGAAACAGTACATTATGGACAATTTTCTTCTTATGATCAATGGCAATGCAGGGGTAATGCTAATGCTAGAGGTGATTTGTATCATCATGCATTGGATTTGCCATATGAATTTCACATGCAAGATAGCAATAGTGTTGTGGCTACCCCTTTTATGGAGTACTCTTATTATCCTGAGATTTTATATGAAACTCTTCCCATTGAGCCTGCACCACCATTAAGCATACTAGACTATGACTTTGATGATGATGTTAAGAAGCTGCATTCTATTTGGAATGAAAATGATGCTTTAGGGCATTATTCAGATGATAAAGATGTAGTGAATTTAGCATGCAAGAATAATATTGGAGGAAGTGGCAAAAAGGGAATTAGGAAATTAGATTTGAAGGGTGAGACAATTAGAAATGGAGTAGAGAAAATAAATGGGAGAGGCTTATCAAGGAAAACAATATCTGAGTACTTCTACAAGCCCATAGCACAAGCAGCTAGAGAGCTTAATGTGGGCCTCACACATTTGAAGAGAAGGTGTAGGGAGTTAGGGATTCAGAGGTGGCCCCACAGGAAGCTCATGAGCCTCCAAACCTTAATAAAAAATGTACAGATGGTGCAGGAGCAAGGACAACAAGAGGGAAATAGAATTGATGAAGAAAAAATAAAGAATGCAATTGAAATATTGGAGAAAGAAAAGAAATTGTTGGAGGAAATGCCAGATTTGAAGCTTGAAGACAATACAAAAAGGCTTAGACAAGCATGTTTTAAAGCAAACTATAAGAAGAGGAAGCTAATGGTCATGAATTTGATGGAATCATCAGCACAATGTTCTTCCCCCATCATTGGTGGTGCTGCAAGAAGTATTAATTATGGCACATTGGTTGAACAAGATCAACAATATGACATTAAATATATGTTGCCTGATCTTGATGATTCTGCTTTTAACACAATGTTCTAG 993 0.3706 MESQKQLIGWTWYSNNETVHYGQFSSYDQWQCRGNANARGDLYHHALDLPYEFHMQDSNSVVATPFMEYSYYPEILYETLPIEPAPPLSILDYDFDDDVKKLHSIWNENDALGHYSDDKDVVNLACKNNIGGSGKKGIRKLDLKGETIRNGVEKINGRGLSRKTISEYFYKPIAQAARELNVGLTHLKRRCRELGIQRWPHRKLMSLQTLIKNVQMVQEQGQQEGNRIDEEKIKNAIEILEKEKKLLEEMPDLKLEDNTKRLRQACFKANYKKRKLMVMNLMESSAQCSSPIIGGAARSINYGTLVEQDQQYDIKYMLPDLDDSAFNTMF* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2065 330 Coils Coil 230 250 - -
Aev08g2065 330 ProSiteProfiles RWP-RK domain profile. 142 227 IPR003035 -
Aev08g2065 330 PANTHER PROTEIN RKD4 50 288 IPR044607 GO:0003700
Aev08g2065 330 Pfam RWP-RK domain 160 207 IPR003035 -
Aev08g2065 330 PANTHER PROTEIN RKD1-RELATED 50 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2065 Aev-Chr8 19754801 19757402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2065 157 275 AtRKD Transcription Factor Family AT1G18790 63.866 6.12e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aev08g2065 RWP-RK 2.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2065 - - vun:114163408 214.927