Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g2056 ATGGCCACCGTTACTACACAGGCTTCAGCCACCATTTTTAGGCCATGTCCTTCTTCAAAATCTAGGTTTTTAACCGGCTCTTCCGGTAAACTAAACAGGGAAGTGGCTTTTAGGCCAATAGGGTCTCTTCCATCTGCTTCTTTCAAGGTTGAAGCTAAGAAAGGAGAGTGGTTACCTGGTTTGGCCTCCCCAAATTACCTCAATGGAAGTCTTCCGGGTGACAATGGTTTTGACCCTTTGGGGCTTGCTGAGGACCCAGAGAACCTGAAGTGGTTTGTTCAAGCTGAGCTTGTGAATGGACGATGGGCCATGTTAGGTGTTGCAGGGATGTTACTCCCTGAGGTCTTCACCAACATTGGAATCATCAATGTCCCTAAATGGTACGATGCAGGGAAAGAAGAGTACTTTGCTTCTTCATCAACTCTCTTTGTGATCGAGTTCATCTTGTTCCATTATGTTGAGATCAGAAGATGGCAAGACATTAAGAACCCTGGTAGTGTCAACCAAGACCCCATCTTCAAGCAGTACAGCTTGCCCCCTAATGAGGTTGGATACCCTGGTGGCATTTTCAACCCTTTGAACTTTGCACCTACTTTGGAGGCCAAAGAGAAGGAACTTGCCAACGGGAGATTGGCAATGTTGGCATTCTTGGGATTCATTGTTCAACACAATGTGACAGGCAAAGGTCCATTTGACAACCTTTTACAGCACCTCTCTGACCCATGGCACAACACCATAGTCCAAACACTGGGTGGCAACTAA 762 0.4646 MATVTTQASATIFRPCPSSKSRFLTGSSGKLNREVAFRPIGSLPSASFKVEAKKGEWLPGLASPNYLNGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTLGGN* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g2056 253 Gene3D Chlorophyll a/b binding protein domain 64 243 - -
Aev08g2056 253 Pfam Chlorophyll A-B binding protein 64 223 IPR022796 -
Aev08g2056 253 SUPERFAMILY Chlorophyll a-b binding protein 54 250 - -
Aev08g2056 253 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 253 IPR001344 GO:0009765|GO:0016020
Aev08g2056 253 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g2056 Aev-Chr8 19654252 19656483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g2056 39 246 Chloroplast and Mitochondria Gene Families AT3G61470 53.917 5.67e-76 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g2056 K08910 - rcu:8263414 481.1