Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1952 ATGGGTAGCTTCTCTGAAGATGAAGATTCTCCATTTTTTGATGCTCAAGAGGATGCTGATTCCATGTCAGATGCAATATCCGATTGCACTGACACCCCTGACAATAATTCTAGTCATAAGGACGCAATTGTGAATGAGTTTGATTATGAAGTGTGGACTCGGATCCCGCGGAGTGTTGAAGAACGAAGAAGTAAGTTTATGAAGTGGATGGGATCCAGGCATGATCAAATGGCCCTTGAGAATTCAGTAGAAGACGTGTGTAGTAGTCTTGAGAAGGAAGAGGAGGTACGTAGAATAACAGGTAGTCATGGGAGTGTGACCAAAAGTTATGGTTCAGAGGAGGAGTTCTGTATGAGTAGGCCATCATTTTCTTGTTGGTCTAGTGTAAATTCTTCAGAGGAGTTTGGTTTGGTAGAGAACACGCGATTCCAAGATGGTAATCTGGAATGGAGAGCAGGGTGTCATCTTGATCAGCTGGGACAGTGTGGGGAGAAAAGTGACGGTAGATGCGCTGGACTAGAACATTCGGTTGTTGCTGAGGAGCCTGAGGGTTCAGGGAACATATTTGGGGTGTCTCCCTGTTTCCAACAACATGAGATTATGGGTAAGGAGCTTGAAGACAGAGATGCCTTTGAGCCAAGTTCTAAGAGGGATAATAGAAGGGGTTGGTTCAGAAGACTTGGTTCAATAACATGCATGGCTGATAGGCAAGGTGAATCTGATAGCAGCAGACATGGAGGCAATTGTGAAGTCTCAGGATCTAGTAGGATTCAGAAAGTTAAGGTCCGGCTTTGCAGGAAGCACACGAAGGAACTTTCGGCTCTATACATGGGGCAAGATATTCAAGCACATAAGGGTTCAATTTTGACAATGAAGTTCAGTCCTAATTGCCAGTATCTTGCCAGTGCTGGTGAAGATGGAATCGTGCGATTGTGGCGAGTGGTTGAGGACGAACGATGTAATGAAATTGACATTCCAGAAGTTGACTCATCTTGCATTTACTTTACAGTGAATAATCTCTCTGAATTGACACCATTATTTATGGATAAGGAAAAACTAAGTAAAGTGAAAAGCCTGAAGAAAACATCAGATTCAGCTTGCATTGTTTTCCCTCCCAAGGTATTCCGATTGTTGGAGAAACCATTGCATGAGTTCCATGGGCATGAAGGGGAAATTTTGGATCTCTCTTGGTCAAAAAATAATTATCTGTTGTCATCTTCAGTTGACAAAACTGTCCGTCTATGGCATGTGGGACAAGACCTTTGCTTGAAAGTTTTTTTGCATAGTAATTATGTGACGTGCATACAATTCAATCCTATGGACGATAATTATTTCATTAGTGGATCTATTGATGGAAAAGTACGCATCTGGGCAATTCCTGATTGTCAAGTTGTTGACTGGACTGATATCAAAGAAATTATCACTGCTATTTGTTATCGTCCCAATGGACAGTTGGATTCTCAGCTATGCTTGCTTGATAAAAAGAAACCTTCTTGTGGAAGAATAACTGGTTTTCAGTTTCTTCCACAAGCTTCTAACAAAGTAATGGTTACCTGTGATGATTCAAAAGTCAGAATCCTTGATGGGCTTAATGTGGTTAGTAAATACAAAGGCCATAATGCCGGGAGACAAATGTCTGCATCTTTTACTTTGGATGGAAAACATATTTTATCAGCATGTGAGGATGCTAAAGTATATCTGTGGAATGTTCGTGATGGTGAGTCTAGCCCCACAAAAGCTAAGAAGATCAAGTCCTGCGAGCATTTTTTTTCAAACGCATCTATTGTAGTACCTTGGTGTGGTTTGAAATATGAAAATATTGAAAGTGCTCACCAATTGGATATCTTCGATAAGAGATCACCTCAAGCTATATGTCTCACTCCCCCTGCTTCATTCTCTCTAAGCCGCGAGTTTTTCTTGGAGTCTTTTACCAAGGGATCTGCTACTTGGCCTGAGGATAAGCTTCCTATTTCAAGCCCCAAGGATAAAACATCAGTGATGCACAAAAACTTTGACTTTTGGAGTGTCCCATTTCAGATTTCAGGAGATTCAGATCACTCATTGATTGGTGACATGTGGTGGCGTTATCATGGTTCTAACCCGCATGAGGCCAAGTTTTGCTTGTCTTGCTACACTGGCCGGTCTTGGTTGCCTTTTCTTACAAAGGAATCAGCTGGCCCTTAA 2184 0.4176 MGSFSEDEDSPFFDAQEDADSMSDAISDCTDTPDNNSSHKDAIVNEFDYEVWTRIPRSVEERRSKFMKWMGSRHDQMALENSVEDVCSSLEKEEEVRRITGSHGSVTKSYGSEEEFCMSRPSFSCWSSVNSSEEFGLVENTRFQDGNLEWRAGCHLDQLGQCGEKSDGRCAGLEHSVVAEEPEGSGNIFGVSPCFQQHEIMGKELEDRDAFEPSSKRDNRRGWFRRLGSITCMADRQGESDSSRHGGNCEVSGSSRIQKVKVRLCRKHTKELSALYMGQDIQAHKGSILTMKFSPNCQYLASAGEDGIVRLWRVVEDERCNEIDIPEVDSSCIYFTVNNLSELTPLFMDKEKLSKVKSLKKTSDSACIVFPPKVFRLLEKPLHEFHGHEGEILDLSWSKNNYLLSSSVDKTVRLWHVGQDLCLKVFLHSNYVTCIQFNPMDDNYFISGSIDGKVRIWAIPDCQVVDWTDIKEIITAICYRPNGQLDSQLCLLDKKKPSCGRITGFQFLPQASNKVMVTCDDSKVRILDGLNVVSKYKGHNAGRQMSASFTLDGKHILSACEDAKVYLWNVRDGESSPTKAKKIKSCEHFFSNASIVVPWCGLKYENIESAHQLDIFDKRSPQAICLTPPASFSLSREFFLESFTKGSATWPEDKLPISSPKDKTSVMHKNFDFWSVPFQISGDSDHSLIGDMWWRYHGSNPHEAKFCLSCYTGRSWLPFLTKESAGP* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1952 727 MobiDBLite consensus disorder prediction 1 40 - -
Aev08g1952 727 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 6 670 - -
Aev08g1952 727 PRINTS G protein beta WD-40 repeat signature 445 459 IPR020472 -
Aev08g1952 727 PRINTS G protein beta WD-40 repeat signature 300 314 IPR020472 -
Aev08g1952 727 PRINTS G protein beta WD-40 repeat signature 403 417 IPR020472 -
Aev08g1952 727 ProSiteProfiles Trp-Asp (WD) repeats profile. 546 578 IPR001680 GO:0005515
Aev08g1952 727 PANTHER WD REPEAT DOMAIN 44 6 670 IPR040324 -
Aev08g1952 727 ProSiteProfiles Trp-Asp (WD) repeats profile. 385 417 IPR001680 GO:0005515
Aev08g1952 727 ProSiteProfiles Trp-Asp (WD) repeats profile. 425 457 IPR001680 GO:0005515
Aev08g1952 727 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 281 314 - -
Aev08g1952 727 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 385 417 - -
Aev08g1952 727 SUPERFAMILY WD40 repeat-like 280 575 IPR036322 GO:0005515
Aev08g1952 727 Pfam WD domain, G-beta repeat 380 415 IPR001680 GO:0005515
Aev08g1952 727 Pfam WD domain, G-beta repeat 422 457 IPR001680 GO:0005515
Aev08g1952 727 Pfam WD domain, G-beta repeat 282 312 IPR001680 GO:0005515
Aev08g1952 727 SMART WD40_4 529 569 IPR001680 GO:0005515
Aev08g1952 727 SMART WD40_4 378 416 IPR001680 GO:0005515
Aev08g1952 727 SMART WD40_4 274 313 IPR001680 GO:0005515
Aev08g1952 727 SMART WD40_4 419 458 IPR001680 GO:0005515
Aev08g1952 727 SMART WD40_4 488 528 IPR001680 GO:0005515
Aev08g1952 727 Gene3D - 498 630 IPR015943 GO:0005515
Aev08g1952 727 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 425 457 - -
Aev08g1952 727 Gene3D - 236 497 IPR015943 GO:0005515
Aev08g1952 727 ProSiteProfiles Trp-Asp (WD) repeats profile. 281 322 IPR001680 GO:0005515
Aev08g1952 727 MobiDBLite consensus disorder prediction 23 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1952 Aev-Chr8 17691275 17696203 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1952 281 473 U-box Gene Family AT2G33340 22.172 1.89e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1952 - - gmx:100807177 814.298