Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1943 ATGTACCCTCAGCAGCAGCAGCAACAACAAATAGTTCCCTTCACAAACTACCATCAACAACAACAGTACTATTCTTCTTCTACAAATCCGTTTCTATGGGCTGCTTCTTCTTCTTCTCTCCCTTCAGATTCTTCTACTCTTCACCCTCCAGGAACCGAACCTGTCTCCAATTCCAACGTGTTCGATCCAAATTCAACCCTTTCTGCTTATTCTTATGGTGCCCAACCATCAGATTCTCAGAACTGGGTCGTCAATTATGATGCTGCTGTTGGATCATCAACGAACGAGACATCGGTGGTACCTTCAAGTTTGCCTTTGACATGGAACGACACATGGCTACAGCAACATTTCACTAGTGCTGCTACAGCAGTGTTGCCTAACCAAACCAAAGCTGCCAAATCAATGAGATGTGAGGTTTGCAAGATTGATTGCAATAGCAAAGAAGTTTATGAAACACACATATCAGGAAAGAAACACAAGAAGAATTTGCAGATTCAGGCTAATCCCACCAATACAACATCATCAGGACCCTCTCAAGCAATTGTACAGAGTAAAACAAGTAGTAGCCAAGGACAAGTGTTAACCGGTCCTGTAGACTCTAAGAAACGGAAGGTTTCAAATGGCGGTGCTCCTGTTGATTCCGTAAAGGTTTGCTCGGTGTGCAACATTGTGTGCAATAGTCAAGAAGTATATAACAAGCATCTAGCTGGGAAAAAGCATGCAGCTCAGGTTGCCTTGATGTCTAATAATGGGATCGGTCCATATATTGCCGCATTTAAGCGTGAAGGCGCTGGTCCATGGAAAAAGGCTCCAAAGAAAATCAAAGTTGTGCAACCTTCATGGTGTGAAGTTTGCAAGGTCAACTGTAACAGCCCGGATATGTATGCTGCACACATATCCGGTAAGAAACACCTGAAGAACGTGGAGAAACTTTCAAAACCGAAAAACGACACCGGTTCTGGTGCCGGTGCAGCAAATGCTTCGCAGGGTGCTGCAAATCTGATAATCGGGCCACAGGAAAAGCCAGCTACTGATAAACCGAAAGCAAAAAAGGCGCCGGATATGGATATCGAGCTGAAGAAACGGAAAGTTGTGGAAGGTGGAGCTGCAGCAGCTGATGTTAGATTGTGTACCCTTTGCAATGTGGTGTGCAACAGCGAAGTTGTTTACAATGATCACCTTTCTGGGCATAAACATGCTGCAATGGTGAAGAAGCATGCAGAGTCAAGAATTGAAACAACTACTGGCTGA 1251 0.4444 MYPQQQQQQQIVPFTNYHQQQQYYSSSTNPFLWAASSSSLPSDSSTLHPPGTEPVSNSNVFDPNSTLSAYSYGAQPSDSQNWVVNYDAAVGSSTNETSVVPSSLPLTWNDTWLQQHFTSAATAVLPNQTKAAKSMRCEVCKIDCNSKEVYETHISGKKHKKNLQIQANPTNTTSSGPSQAIVQSKTSSSQGQVLTGPVDSKKRKVSNGGAPVDSVKVCSVCNIVCNSQEVYNKHLAGKKHAAQVALMSNNGIGPYIAAFKREGAGPWKKAPKKIKVVQPSWCEVCKVNCNSPDMYAAHISGKKHLKNVEKLSKPKNDTGSGAGAANASQGAANLIIGPQEKPATDKPKAKKAPDMDIELKKRKVVEGGAAAADVRLCTLCNVVCNSEVVYNDHLSGHKHAAMVKKHAESRIETTTG* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1943 416 Gene3D Classic Zinc Finger 268 315 - -
Aev08g1943 416 SMART ZnF_U1_5 277 311 IPR003604 GO:0003676|GO:0008270
Aev08g1943 416 SMART ZnF_U1_5 213 247 IPR003604 GO:0003676|GO:0008270
Aev08g1943 416 SMART ZnF_U1_5 132 166 IPR003604 GO:0003676|GO:0008270
Aev08g1943 416 SMART ZnF_U1_5 372 406 IPR003604 GO:0003676|GO:0008270
Aev08g1943 416 SUPERFAMILY beta-beta-alpha zinc fingers 276 311 IPR036236 -
Aev08g1943 416 SUPERFAMILY beta-beta-alpha zinc fingers 374 406 IPR036236 -
Aev08g1943 416 Gene3D Classic Zinc Finger 197 247 - -
Aev08g1943 416 Gene3D Classic Zinc Finger 115 166 - -
Aev08g1943 416 Gene3D Classic Zinc Finger 355 407 - -
Aev08g1943 416 Pfam Zinc-finger of C2H2 type 377 399 - -
Aev08g1943 416 Pfam Zinc-finger of C2H2 type 137 159 - -
Aev08g1943 416 Pfam Zinc-finger of C2H2 type 281 304 - -
Aev08g1943 416 Pfam Zinc-finger of C2H2 type 217 240 - -
Aev08g1943 416 PANTHER ZINC FINGER RNA-BINDING PROTEIN 258 409 - -
Aev08g1943 416 PANTHER - 6 249 - -
Aev08g1943 416 MobiDBLite consensus disorder prediction 161 196 - -
Aev08g1943 416 MobiDBLite consensus disorder prediction 159 210 - -
Aev08g1943 416 SUPERFAMILY beta-beta-alpha zinc fingers 116 165 IPR036236 -
Aev08g1943 416 PANTHER ZINC FINGER RNA-BINDING PROTEIN 6 249 - -
Aev08g1943 416 SUPERFAMILY beta-beta-alpha zinc fingers 212 247 IPR036236 -
Aev08g1943 416 PANTHER - 258 409 - -
Aev08g1943 416 SMART c2h2final6 280 304 IPR013087 -
Aev08g1943 416 SMART c2h2final6 375 397 IPR013087 -
Aev08g1943 416 SMART c2h2final6 216 240 IPR013087 -
Aev08g1943 416 SMART c2h2final6 135 159 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1943 Aev-Chr8 17576892 17579654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1943 209 403 C2H2 Transcription Factor Family AT5G61190 29.949 1.25e-21 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1943 - - aprc:113848135 472.241