Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1909 ATGATGGAAGATGTTATTCTTGAAGGAGATCAATATTCCACAAAACAATCATTTGATGGACAACCTGACATGGTTAATGAATGGGTGCCTACCTGTGATGATCAATTTAAACCTGTCATTGGAATGATATTTGATAATTTAGAAGAATGTGAGAGCTTTTATAAAACATATGCACATAATGTTGGTTTTAGTGTGCGTAACTCCTCTGTGACTAAAGATAGCAGTGGCAAGAAGCTTTGGAAGTATTTTGTTTGTTCAAAACAAGGCTTTAAAGAAGATAAAAAATTGCCCCTGTCCCAAGATAATGTGTTTGTTGAAGGAAAAAGTGCTCCAAAAATTAGGAAAAGAAATCTTATAAGAGAAGGATGTAATGCAAAAGTTGCTTTTAAGATGATGAAAGATGAAAAATATGAGCTTATGAGGTTTAATGAATGTCACACTCATGCACTTGCTTCATCAAGAAAGAGACAATTTCTAAGATCTGCGAGAAAAGTCAATCCTGTTCATAAAACATTGTTGCGCTCTTATAATAGAGCAAATATTGGGGCCTCAAAAGTATATCAGTTAATCAAAGAGCAGGTTGGAGGATTCCAAAATGTTGGATGTAGTAAAAGAGATCTACAAAATTGTTCAAGGGATTTGAAGGCATTGATAAAAAACTCAGATGCTCATATGTTTATTGATAATTTTAAGAGAAAGCAAGAGGCGGATTCATCTTTTTATTATGCATATGATGTAGATGTTGAAGGTCGACTAAAATGCGTCTTTTGGGCAGATGGTCTTTGTAGGAAAAATTATTCATTGTTTGGGGATGTGGTTTCATTCGATACCACATATCAAACAAATAAATATTCCATGATTTTTGCACCTTTTACAGGAATAAATCATCATAGGCAATCAATCACCTTTGGAGCTGCATTCTTAGCAGATGAGAAAGTTGATTCTTTCATTTGGTTATTTGAAAAATTTTTAGAAGCTATGGGAGCACACATGCCAAGCATATTTATAACAGATCAGGATCCAGCTATGAAAATTGCAATAGAGAGTATCTTTTGCTCTTCTACTCATCGATTTTGTATGTGGCATATCTTGAAAAAATTATCAGAGAAGGTTGGTGTTGCTTTAAATAGTAATGGTGATTTTAATAATCGTTTTAAGTCATGTGTTTGGAGGTCTGAAACATCATATGAGTTTGAGTCAACATGGAAAGGAATTATTAGTGACTTTGGATTGGAGAAGAATGCATGGCTCTCACATATGTATGACATAAGAAGCATGTGGATTCCAGCCTACTTTACACATTTATTTTTGGCAGGAATTTCAAGAACAACATCAAGATCTGAGAGCGAAAACTCATTTTATGGAAATTTCTTGAATAGCAATCTTAGCTTAGTTGAATTTTGGATGGGGTTTGACTCTGCATTGGAGGCACAAAGACATAAAGAGTTACTTGCCGATAACAATACACTTCATTCTTTTCCCGAGTTGAAAACAAATAGGGGTCTAGAAAAGCATGCAAGAGATATCTATACTCATGAAAATTTTTATATATTTCAGAATCAGTTATGGGCTGCATGTATGGATTGTGGGATTGAGGATAAGAAAGAAGCAGAAGGGATGTCAATTCTAACCATTAATGATAATAGTGAAGTCAATGGCAAACTGAGAGAAGTGGTTTTTGATGTTTCAAATCACTTTGCCCAATGTTCATGTAAGATGTTTGAATCTGAAGGAGTTCCATGTCGACATATCCTTTGTGTTCTTAAAGGAAAAGGATTACATGAAATACCAAGTGGCTATATTGTTAACAGATGGACAAAATTAGCTACTAGTAAATCCATTTTTGATTCTCAAGGGGATGTATTAGAGGCTTCTTCTAAATATGAAAGTGTAAATAAGATAATATCTGATGCATGGGCTCAATTATTTAGATGTATGCATATTGCTGGACAAAGTGAGGAGAAGTTACTTTTTGTTAAAATTGAAGCTCTTAATATTGAGAAGCAATTAATTCAAATGCAAGGTAATTCTATGCATGGGAAGAGAGAAGAGTTAGAGTCCTTTATTGGTTCTGAAATTACAGATCATATTGAAATCCATCCACCTCTTTATTCAAAGACCAAAGGTAGCAGTAAACGGATTAAAGGAGGAAAAGAGAAGGCAATGGAACAACAACAAAAAAGATCAAGGCTCTGCAAAGCATGTGGACAATATACACATCATGACAGTCGAAATTGTCCCACAAAAATCTCTGAATAA 2259 0.3417 MMEDVILEGDQYSTKQSFDGQPDMVNEWVPTCDDQFKPVIGMIFDNLEECESFYKTYAHNVGFSVRNSSVTKDSSGKKLWKYFVCSKQGFKEDKKLPLSQDNVFVEGKSAPKIRKRNLIREGCNAKVAFKMMKDEKYELMRFNECHTHALASSRKRQFLRSARKVNPVHKTLLRSYNRANIGASKVYQLIKEQVGGFQNVGCSKRDLQNCSRDLKALIKNSDAHMFIDNFKRKQEADSSFYYAYDVDVEGRLKCVFWADGLCRKNYSLFGDVVSFDTTYQTNKYSMIFAPFTGINHHRQSITFGAAFLADEKVDSFIWLFEKFLEAMGAHMPSIFITDQDPAMKIAIESIFCSSTHRFCMWHILKKLSEKVGVALNSNGDFNNRFKSCVWRSETSYEFESTWKGIISDFGLEKNAWLSHMYDIRSMWIPAYFTHLFLAGISRTTSRSESENSFYGNFLNSNLSLVEFWMGFDSALEAQRHKELLADNNTLHSFPELKTNRGLEKHARDIYTHENFYIFQNQLWAACMDCGIEDKKEAEGMSILTINDNSEVNGKLREVVFDVSNHFAQCSCKMFESEGVPCRHILCVLKGKGLHEIPSGYIVNRWTKLATSKSIFDSQGDVLEASSKYESVNKIISDAWAQLFRCMHIAGQSEEKLLFVKIEALNIEKQLIQMQGNSMHGKREELESFIGSEITDHIEIHPPLYSKTKGSSKRIKGGKEKAMEQQQKRSRLCKACGQYTHHDSRNCPTKISE* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1909 752 Pfam FAR1 DNA-binding domain 52 151 IPR004330 -
Aev08g1909 752 MobiDBLite consensus disorder prediction 712 726 - -
Aev08g1909 752 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 8 164 - -
Aev08g1909 752 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 210 630 - -
Aev08g1909 752 SMART 26again6 567 594 IPR006564 GO:0008270
Aev08g1909 752 Pfam SWIM zinc finger 562 587 IPR007527 GO:0008270
Aev08g1909 752 ProSiteProfiles Zinc finger SWIM-type profile. 560 592 IPR007527 GO:0008270
Aev08g1909 752 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 164 IPR031052 GO:0006355
Aev08g1909 752 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 210 630 IPR031052 GO:0006355
Aev08g1909 752 MobiDBLite consensus disorder prediction 704 726 - -
Aev08g1909 752 Pfam MULE transposase domain 272 366 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1909 Aev-Chr8 17153465 17155812 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev08g1909 FAR1 4.5e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1909 - - soe:110798711 852.047