Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1908 ATGGGGAAGACTCCTTGTTGCAGCCATGAGGAATTGAAAAAGGGTGCTTGGACAGTTCAAGAAGACCAGAGACTCATAGCTTACATTCAGAAATATGGCACTGGAAACTGGCGTATCTTGCCACAGAAAGCTGGTCTTCAAAGATGTGGGAAGAGTTGCAGGCTGAGATGGTTTAATTACCTCAGACCTGGCATTAAGAGAGGCCAATTAAGCCAAGAAGAGGAGCATACCATTATAAGGCTTCATGCAGCTCTTGGCAACAGATGGTCAAGTATTGCGAAGCACTTGCCAATGCGAACAGACAATGAAATCAAGAACTATTGGAACTCATATCTAAAGAAGCACTTAGAGGAGAAGAAATGCTTAGATCCATTGAGTCTCAAATCAATTACCACAACTACTAGTTTCTCATCAGATTCAGAAGCTATCACTACCATTGAATCAAGCTCCATTGACATAAACACTATTCCATCAAAGAGTACTAGTACTACTACACACCATTCTCAGCAAGGTTCATCAAAGTCAACCTCATCATCATCTTCAACTAATCTACTCAACAAAGTTGCAAGAAAAATTGTGGGGTCAGGTTATCTTGATGCAGTAAAATCATCATCATCATGGCAACATGTTAACACTATTGACAAAGTAACTAAAAGGGTAACAGAGTATAAAGCAGGGGATAATAGTGTTATGCAATGTCATAGTCATTCTTCAAGTGCTTCTGCAAGGTTACTGAACAAAATGGCCACTTCTCTATCTCTCAGAGTTCAATGCCATGAAGCTGCAAGATCAGTGTTTTCAGAGTTCATAATGGGGGGCTGTGAAAAAAGTGAGACTAATGACCAAGTTGGGAATTGTTTATTGGATCATGCTATAGCAAGCACTTTTGAGGATGGACCACATATAACAAGTGCAATTGGTTCATCACCTTCATGCTTTTCAGAAGATAATAATAATAATAATAATAATAATAATAATGAAGATGATTGGCTATGTGCTAACTCTATTTCTTTTGGGAATTGTGGTGGTGGTGAGAGTAGTGTATCTGAAGTCAATTTGGTAAGCAGTGACACTGGAAAATGTTATACTGAGTCTTCTAATTCAACCACATCTTGCTTCCTAGATGAAGATGTAGCAGCAACAACATTATTTGATGATGAATTGATTGAAATTTTGAGGTGTGAGGATCAGATGAACATGTACATTATTTAA 1212 0.382 MGKTPCCSHEELKKGAWTVQEDQRLIAYIQKYGTGNWRILPQKAGLQRCGKSCRLRWFNYLRPGIKRGQLSQEEEHTIIRLHAALGNRWSSIAKHLPMRTDNEIKNYWNSYLKKHLEEKKCLDPLSLKSITTTTSFSSDSEAITTIESSSIDINTIPSKSTSTTTHHSQQGSSKSTSSSSSTNLLNKVARKIVGSGYLDAVKSSSSWQHVNTIDKVTKRVTEYKAGDNSVMQCHSHSSSASARLLNKMATSLSLRVQCHEAARSVFSEFIMGGCEKSETNDQVGNCLLDHAIASTFEDGPHITSAIGSSPSCFSEDNNNNNNNNNNEDDWLCANSISFGNCGGGESSVSEVNLVSSDTGKCYTESSNSTTSCFLDEDVAATTLFDDELIEILRCEDQMNMYII* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1908 403 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev08g1908 403 Gene3D - 69 134 - -
Aev08g1908 403 SMART sant 66 114 IPR001005 -
Aev08g1908 403 SMART sant 13 63 IPR001005 -
Aev08g1908 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Aev08g1908 403 CDD SANT 16 61 IPR001005 -
Aev08g1908 403 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 285 - -
Aev08g1908 403 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev08g1908 403 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Aev08g1908 403 MobiDBLite consensus disorder prediction 154 182 - -
Aev08g1908 403 CDD SANT 71 112 IPR001005 -
Aev08g1908 403 PANTHER TRANSCRIPTION FACTOR MYB51 1 285 - -
Aev08g1908 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aev08g1908 403 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev08g1908 403 Gene3D - 13 66 - -
Aev08g1908 403 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1908 Aev-Chr8 17146866 17151236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1908 1 192 MYB Transcription Factor Family AT1G74080 53.646 4.09e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev08g1908 Myb_DNA-binding 5.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1908 K09422 - gmx:100775267 311.612